Variant report

Variant rs9536042
Chromosome Location chr13:52952575-52952576
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:52946000-52952800 Weak transcription Gastric stomach
2 chr13:52946000-52969600 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr13:52946200-52952600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr13:52946200-52979200 Weak transcription A549 lung
5 chr13:52947800-52968000 Weak transcription NHDF-Ad bronchial
6 chr13:52949000-52955800 Weak transcription Brain Angular Gyrus brain
7 chr13:52949600-52952800 Weak transcription Liver Liver
8 chr13:52949800-52979000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr13:52950200-52954200 Strong transcription HSMM muscle
10 chr13:52950400-52952600 Weak transcription Brain Inferior Temporal Lobe brain
11 chr13:52950600-52952600 Strong transcription Osteobl bone
12 chr13:52950600-52953600 Strong transcription HSMMtube muscle
13 chr13:52951000-52952600 Weak transcription Primary T cells from cord blood blood
14 chr13:52951000-52953400 Weak transcription Thymus Thymus
15 chr13:52951000-52953600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr13:52951200-52953400 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr13:52951200-52961400 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr13:52951400-52952800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr13:52951400-52955800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr13:52951600-52953000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr13:52951800-52952600 Strong transcription Brain Germinal Matrix brain
22 chr13:52951800-52952800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr13:52951800-52952800 Strong transcription Muscle Satellite Cultured Cells --
24 chr13:52951800-52952800 ZNF genes & repeats Esophagus oesophagus
25 chr13:52951800-52952800 Strong transcription Left Ventricle heart
26 chr13:52951800-52952800 Strong transcription Right Ventricle heart
27 chr13:52951800-52952800 Strong transcription Stomach Smooth Muscle stomach
28 chr13:52951800-52952800 Strong transcription Spleen Spleen
29 chr13:52951800-52952800 Strong transcription NHLF lung
30 chr13:52951800-52953000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr13:52951800-52953000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr13:52951800-52953000 Strong transcription Adipose Nuclei Adipose
33 chr13:52951800-52953000 Strong transcription Fetal Intestine Small intestine
34 chr13:52951800-52953000 Strong transcription Fetal Stomach stomach
35 chr13:52951800-52953000 Genic enhancers Lung lung
36 chr13:52951800-52953000 Strong transcription Skeletal Muscle Male skeletal muscle
37 chr13:52951800-52953200 Strong transcription Fetal Muscle Leg muscle
38 chr13:52951800-52954000 Strong transcription Breast Myoepithelial Primary Cells Breast
39 chr13:52951800-52954400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr13:52951800-52954400 Strong transcription Fetal Muscle Trunk muscle
41 chr13:52951800-52955400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr13:52951800-52955800 Strong transcription Cortex derived primary cultured neurospheres brain
43 chr13:52952000-52952600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr13:52952000-52952600 Strong transcription Fetal Intestine Large intestine
45 chr13:52952000-52952800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr13:52952000-52952800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr13:52952000-52952800 ZNF genes & repeats Aorta Aorta
48 chr13:52952000-52952800 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr13:52952000-52952800 Strong transcription NHEK skin
50 chr13:52952000-52953000 Strong transcription Ovary ovary

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