Variant report

Variant rs61959675
Chromosome Location chr13:53022562-53022563
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:52981000-53022800 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr13:52984400-53023400 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr13:52987200-53023600 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr13:52989000-53022800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr13:52995200-53023800 Weak transcription Aorta Aorta
6 chr13:52995800-53023800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr13:53008600-53023600 Weak transcription Brain Cingulate Gyrus brain
8 chr13:53010200-53022800 Weak transcription Placenta Amnion Placenta Amnion
9 chr13:53013400-53022800 Weak transcription NHLF lung
10 chr13:53013400-53023400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr13:53014800-53022600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr13:53015400-53023200 Weak transcription Colonic Mucosa Colon
13 chr13:53015400-53023400 Weak transcription Fetal Kidney kidney
14 chr13:53015400-53023600 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr13:53016400-53023400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr13:53016600-53022600 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr13:53016800-53022600 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr13:53016800-53023000 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr13:53016800-53023400 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr13:53017600-53022800 Weak transcription Fetal Intestine Large intestine
21 chr13:53019400-53023600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr13:53019600-53022800 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr13:53020600-53023200 Enhancers Placenta Placenta
24 chr13:53020800-53022600 Weak transcription HUES64 Cell Line embryonic stem cell
25 chr13:53021000-53023400 Enhancers Pancreas Pancrea
26 chr13:53021600-53022600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr13:53021600-53022600 Enhancers Primary mononuclear cells fromperipheralblood Blood
28 chr13:53021600-53022600 Genic enhancers Brain Dorsolateral Prefrontal Cortex brain
29 chr13:53021600-53022600 Enhancers Duodenum Smooth Muscle Duodenum
30 chr13:53021600-53022600 Genic enhancers Fetal Intestine Small intestine
31 chr13:53021600-53022800 Enhancers Primary T helper cells fromperipheralblood blood
32 chr13:53021600-53022800 Enhancers Primary T regulatory cells fromperipheralblood blood
33 chr13:53021600-53022800 Enhancers Brain Inferior Temporal Lobe brain
34 chr13:53021600-53022800 Enhancers Esophagus oesophagus
35 chr13:53021600-53022800 Enhancers NHDF-Ad bronchial
36 chr13:53021600-53023000 Enhancers Skeletal Muscle Male skeletal muscle
37 chr13:53021600-53023000 Enhancers Skeletal Muscle Female skeletal muscle
38 chr13:53021600-53023000 Enhancers Stomach Smooth Muscle stomach
39 chr13:53021600-53023000 Enhancers Spleen Spleen
40 chr13:53021600-53023200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr13:53021600-53023200 Enhancers Small Intestine intestine
42 chr13:53021600-53023200 Transcr. at gene 5' and 3' Dnd41 blood
43 chr13:53021600-53023200 Flanking Active TSS GM12878-XiMat blood
44 chr13:53021600-53023200 Flanking Active TSS NHEK skin
45 chr13:53021600-53023400 Enhancers Colon Smooth Muscle Colon
46 chr13:53021600-53023600 Enhancers Primary B cells from peripheral blood blood
47 chr13:53021600-53023600 Enhancers Primary T cells fromperipheralblood blood
48 chr13:53021600-53023600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
49 chr13:53021600-53023600 Enhancers Primary T helper naive cells fromperipheralblood blood
50 chr13:53021600-53023600 Enhancers Primary T helper memory cells from peripheral blood 1 blood

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