The 2.0 version of rSNPBase

Variant report

Variant rs61957978
Chromosome Location chr13:52924249-52924250
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:23 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:52918800-52924400 Enhancers HMEC breast
2 chr13:52920000-52924400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr13:52921600-52924400 Enhancers Cortex derived primary cultured neurospheres brain
4 chr13:52921600-52924400 Enhancers Osteobl bone
5 chr13:52922200-52924400 Enhancers Muscle Satellite Cultured Cells --
6 chr13:52922200-52924400 Enhancers NHEK skin
7 chr13:52922200-52924600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr13:52923000-52924400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr13:52923200-52925000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr13:52923400-52929800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr13:52923600-52925600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr13:52923600-52927000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr13:52923600-52927200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr13:52923600-52930200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr13:52923800-52927000 Weak transcription NHLF lung
16 chr13:52923800-52927200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr13:52924000-52927000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr13:52924000-52927000 Weak transcription HSMMtube muscle
19 chr13:52924000-52927000 Weak transcription NHDF-Ad bronchial
20 chr13:52924000-52927200 Weak transcription HSMM muscle
21 chr13:52924000-52930000 Weak transcription Hela-S3 cervix
22 chr13:52924200-52927200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr13:52924200-52927200 Weak transcription NH-A brain

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Last update: Aug 31, 2015