Variant report

Variant rs9536062
Chromosome Location chr13:52971718-52971719
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:52946200-52979200 Weak transcription A549 lung
2 chr13:52949800-52979000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr13:52956200-52978200 Weak transcription Stomach Smooth Muscle stomach
4 chr13:52967000-52972200 Genic enhancers Cortex derived primary cultured neurospheres brain
5 chr13:52967800-52978800 Weak transcription NH-A brain
6 chr13:52968200-52979600 Weak transcription Gastric stomach
7 chr13:52968400-52978600 Weak transcription Muscle Satellite Cultured Cells --
8 chr13:52968400-52978600 Weak transcription NHDF-Ad bronchial
9 chr13:52968800-52972600 Strong transcription HMEC breast
10 chr13:52969000-52972200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr13:52969000-52972400 Strong transcription Osteobl bone
12 chr13:52969000-52977600 Strong transcription HSMM muscle
13 chr13:52969200-52972000 Strong transcription HSMMtube muscle
14 chr13:52969200-52972200 Strong transcription NHEK skin
15 chr13:52969200-52972400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr13:52969200-52972600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr13:52969400-52972600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr13:52969400-52974400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr13:52969600-52978600 Weak transcription Fetal Brain Male brain
20 chr13:52969800-52973200 Weak transcription Brain Inferior Temporal Lobe brain
21 chr13:52970000-52979200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr13:52970000-52979400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr13:52970200-52971800 Weak transcription Right Atrium heart
24 chr13:52970200-52972600 Weak transcription Brain Hippocampus Middle brain
25 chr13:52970200-52973000 Weak transcription Brain Anterior Caudate brain
26 chr13:52970200-52973400 Weak transcription Fetal Brain Female brain
27 chr13:52970200-52977200 Weak transcription Adipose Nuclei Adipose
28 chr13:52970200-52979400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr13:52970200-52979400 Weak transcription Brain Cingulate Gyrus brain
30 chr13:52970400-52978200 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr13:52970800-52972200 Strong transcription HUVEC blood vessel
32 chr13:52971000-52971800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr13:52971200-52972000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr13:52971200-52972000 Strong transcription NHLF lung
35 chr13:52971200-52972200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr13:52971400-52971800 Genic enhancers Right Ventricle heart
37 chr13:52971400-52972200 Genic enhancers Left Ventricle heart
38 chr13:52971400-52972400 Genic enhancers Lung lung
39 chr13:52971600-52971800 Genic enhancers Fetal Muscle Trunk muscle
40 chr13:52971600-52971800 Enhancers Pancreas Pancrea
41 chr13:52971600-52972200 Genic enhancers Spleen Spleen
42 chr13:52971600-52972600 Genic enhancers Fetal Muscle Leg muscle
43 chr13:52971600-52972800 Genic enhancers Breast Myoepithelial Primary Cells Breast

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