The 2.0 version of rSNPBase

Variant report

Variant rs61957995
Chromosome Location chr13:52949333-52949334
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:52934000-52951800 Weak transcription Fetal Intestine Small intestine
2 chr13:52944800-52949600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr13:52945400-52949400 Enhancers HUVEC blood vessel
4 chr13:52946000-52949600 Weak transcription Spleen Spleen
5 chr13:52946000-52951800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr13:52946000-52951800 Weak transcription Adipose Nuclei Adipose
7 chr13:52946000-52951800 Weak transcription Fetal Muscle Trunk muscle
8 chr13:52946000-52951800 Weak transcription Left Ventricle heart
9 chr13:52946000-52951800 Weak transcription Lung lung
10 chr13:52946000-52951800 Weak transcription Pancreas Pancrea
11 chr13:52946000-52951800 Weak transcription Right Ventricle heart
12 chr13:52946000-52952000 Weak transcription Aorta Aorta
13 chr13:52946000-52952000 Weak transcription Ovary ovary
14 chr13:52946000-52952800 Weak transcription Gastric stomach
15 chr13:52946000-52969600 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr13:52946200-52951800 Weak transcription Esophagus oesophagus
17 chr13:52946200-52951800 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr13:52946200-52952000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr13:52946200-52952600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr13:52946200-52979200 Weak transcription A549 lung
21 chr13:52946800-52951800 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr13:52946800-52951800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr13:52946800-52951800 Weak transcription Fetal Muscle Leg muscle
24 chr13:52947400-52951800 Weak transcription NHLF lung
25 chr13:52947600-52951800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr13:52947800-52950600 Weak transcription HSMMtube muscle
27 chr13:52947800-52968000 Weak transcription NHDF-Ad bronchial
28 chr13:52948000-52951800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr13:52948000-52952000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr13:52948000-52952000 Weak transcription NHEK skin
31 chr13:52948600-52949400 Enhancers Muscle Satellite Cultured Cells --
32 chr13:52948600-52949400 Genic enhancers HSMM muscle
33 chr13:52948600-52949800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr13:52948600-52950800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr13:52948800-52949400 Enhancers Fetal Lung lung
36 chr13:52949000-52949400 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr13:52949000-52949400 Enhancers HMEC breast
38 chr13:52949000-52949600 Enhancers Osteobl bone
39 chr13:52949000-52955800 Weak transcription Brain Angular Gyrus brain
40 chr13:52949200-52949400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr13:52949200-52949400 Enhancers NH-A brain
42 chr13:52949200-52949600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr13:52949200-52949600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
44 chr13:52949200-52949600 Enhancers Liver Liver
45 chr13:52949200-52951800 Weak transcription Brain Germinal Matrix brain

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Last update: Aug 31, 2015