The 2.0 version of rSNPBase

Variant report

Variant rs61957993
Chromosome Location chr13:52947752-52947753
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:52934000-52951800 Weak transcription Fetal Intestine Small intestine
2 chr13:52944800-52947800 Enhancers HSMM muscle
3 chr13:52944800-52949600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr13:52945400-52947800 Enhancers NH-A brain
5 chr13:52945400-52947800 Enhancers Osteobl bone
6 chr13:52945400-52948000 Enhancers HMEC breast
7 chr13:52945400-52948200 Enhancers Muscle Satellite Cultured Cells --
8 chr13:52945400-52949400 Enhancers HUVEC blood vessel
9 chr13:52945600-52947800 Enhancers HSMMtube muscle
10 chr13:52945800-52948000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr13:52945800-52948000 Enhancers NHEK skin
12 chr13:52945800-52948600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr13:52946000-52949600 Weak transcription Spleen Spleen
14 chr13:52946000-52951800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr13:52946000-52951800 Weak transcription Adipose Nuclei Adipose
16 chr13:52946000-52951800 Weak transcription Fetal Muscle Trunk muscle
17 chr13:52946000-52951800 Weak transcription Left Ventricle heart
18 chr13:52946000-52951800 Weak transcription Lung lung
19 chr13:52946000-52951800 Weak transcription Pancreas Pancrea
20 chr13:52946000-52951800 Weak transcription Right Ventricle heart
21 chr13:52946000-52952000 Weak transcription Aorta Aorta
22 chr13:52946000-52952000 Weak transcription Ovary ovary
23 chr13:52946000-52952800 Weak transcription Gastric stomach
24 chr13:52946000-52969600 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr13:52946200-52951800 Weak transcription Esophagus oesophagus
26 chr13:52946200-52951800 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr13:52946200-52952000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr13:52946200-52952600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr13:52946200-52979200 Weak transcription A549 lung
30 chr13:52946400-52949000 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr13:52946600-52949200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr13:52946800-52951800 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr13:52946800-52951800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr13:52946800-52951800 Weak transcription Fetal Muscle Leg muscle
35 chr13:52947200-52947800 Enhancers NHDF-Ad bronchial
36 chr13:52947400-52949200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr13:52947400-52951800 Weak transcription NHLF lung
38 chr13:52947600-52948000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
39 chr13:52947600-52948600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr13:52947600-52951800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015