The 2.0 version of rSNPBase

Variant report

Variant rs9741870
Chromosome Location chr13:52966190-52966191
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:52946000-52969600 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr13:52946200-52979200 Weak transcription A549 lung
3 chr13:52947800-52968000 Weak transcription NHDF-Ad bronchial
4 chr13:52949800-52979000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr13:52952600-52969200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr13:52952800-52967000 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr13:52952800-52968000 Weak transcription Muscle Satellite Cultured Cells --
8 chr13:52952800-52969000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr13:52952800-52969200 Weak transcription Fetal Brain Female brain
10 chr13:52952800-52969200 Weak transcription Spleen Spleen
11 chr13:52952800-52969200 Weak transcription NHEK skin
12 chr13:52952800-52969600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr13:52952800-52969600 Weak transcription NHLF lung
14 chr13:52952800-52971400 Weak transcription Right Ventricle heart
15 chr13:52953000-52968000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr13:52953000-52970000 Weak transcription Ovary ovary
17 chr13:52955600-52969600 Weak transcription Lung lung
18 chr13:52956200-52978200 Weak transcription Stomach Smooth Muscle stomach
19 chr13:52957400-52967000 Strong transcription Cortex derived primary cultured neurospheres brain
20 chr13:52957800-52969000 Weak transcription Adipose Nuclei Adipose
21 chr13:52957800-52969600 Weak transcription Fetal Stomach stomach
22 chr13:52958000-52969200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr13:52958000-52969200 Weak transcription HSMMtube muscle
24 chr13:52958000-52969400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr13:52958000-52970800 Weak transcription Fetal Lung lung
26 chr13:52960800-52969000 Weak transcription Osteobl bone
27 chr13:52961000-52968000 Weak transcription Fetal Muscle Trunk muscle
28 chr13:52961200-52969000 Weak transcription Right Atrium heart
29 chr13:52961400-52967800 Weak transcription Brain Anterior Caudate brain
30 chr13:52961400-52969000 Weak transcription Left Ventricle heart
31 chr13:52961400-52969200 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr13:52963800-52966800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr13:52964600-52966800 Strong transcription HUVEC blood vessel
34 chr13:52964800-52968000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr13:52964800-52968000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr13:52964800-52968800 Weak transcription HMEC breast
37 chr13:52964800-52969000 Weak transcription Brain Substantia Nigra brain
38 chr13:52964800-52969400 Weak transcription Brain Inferior Temporal Lobe brain
39 chr13:52965000-52967800 Weak transcription Brain Cingulate Gyrus brain
40 chr13:52965000-52968000 Weak transcription Brain Hippocampus Middle brain
41 chr13:52965000-52969000 Weak transcription Brain Angular Gyrus brain
42 chr13:52965600-52968000 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr13:52965600-52969200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr13:52965800-52966600 Weak transcription HSMM muscle
45 chr13:52966000-52968000 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015