Variant report

Variant	rs62325265
Chromosome Location	chr4:110923592-110923593
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10002971	0.91[AMR][1000 genomes]
rs11568994	0.88[AMR][1000 genomes]
rs11569100	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17041245	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17253063	0.88[AMR][1000 genomes]
rs17320827	0.84[ASN][1000 genomes]
rs62325266	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62325289	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6533487	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6850557	0.95[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs720419	0.88[EUR][1000 genomes]
rs721412	0.84[EUR][1000 genomes]
rs7440841	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7685010	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7698924	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9991904	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9999824	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:110895000-110928600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr4:110901000-110929600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr4:110907000-110932400	Weak transcription	Psoas Muscle	Psoas
4	chr4:110907800-110927400	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr4:110910400-110935200	Weak transcription	Pancreas	Pancrea
6	chr4:110910600-110929800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr4:110910800-110926800	Weak transcription	Fetal Heart	heart
8	chr4:110919000-110935200	Weak transcription	Left Ventricle	heart
9	chr4:110920800-110935800	Strong transcription	Skeletal Muscle Female	skeletal muscle
10	chr4:110921000-110924800	Weak transcription	Fetal Intestine Large	intestine
11	chr4:110921000-110926800	Weak transcription	Duodenum Mucosa	Duodenum
12	chr4:110921000-110926800	Weak transcription	HepG2	liver
13	chr4:110921000-110927600	Weak transcription	Fetal Intestine Small	intestine
14	chr4:110923000-110923800	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
15	chr4:110923400-110923600	Enhancers	Rectal Mucosa Donor 31	rectum

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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