Variant report

Variant	rs9999824
Chromosome Location	chr4:110935774-110935775
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10002971	0.81[AMR][1000 genomes]
rs11569100	0.88[CEU][hapmap];1.00[CHB][hapmap];0.89[YRI][hapmap];1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17041245	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs17320827	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17320841	0.92[JPT][hapmap]
rs62325265	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62325266	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62325289	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6533487	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6850557	0.83[CEU][hapmap];0.84[AMR][1000 genomes]
rs720419	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs721412	0.90[EUR][1000 genomes]
rs7440841	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7685010	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7698924	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9991904	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:110920800-110935800	Strong transcription	Skeletal Muscle Female	skeletal muscle
2	chr4:110930000-110937200	Weak transcription	Fetal Intestine Small	intestine
3	chr4:110930400-110941600	Weak transcription	Fetal Heart	heart
4	chr4:110930800-110941600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr4:110931000-110937000	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr4:110931000-110937600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
7	chr4:110931000-110941600	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr4:110935200-110935800	Strong transcription	Left Ventricle	heart
9	chr4:110935200-110935800	Strong transcription	Pancreas	Pancrea
10	chr4:110935400-110935800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr4:110935400-110941200	Weak transcription	HUES48 Cell Line	embryonic stem cell
12	chr4:110935600-110941200	Weak transcription	Fetal Kidney	kidney

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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