Variant report

No.	Distal block	Cell Line	Cell type
1	chr6:147154309..147156343-chr6:147188785..147190711,2	K562	blood:
2	chr6:147145786..147148861-chr6:147153065..147155716,3	K562	blood:
3	chr6:147153414..147155805-chr6:147165239..147167111,2	K562	blood:

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs12660761	1.00[AMR][1000 genomes]
rs12665618	1.00[AMR][1000 genomes]
rs1324682	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17076396	1.00[AMR][1000 genomes]
rs17076398	1.00[AMR][1000 genomes]
rs17076402	1.00[AMR][1000 genomes]
rs17076405	1.00[AMR][1000 genomes]
rs17076406	1.00[AMR][1000 genomes]
rs17076409	1.00[AMR][1000 genomes]
rs62434396	1.00[AMR][1000 genomes]
rs62434397	1.00[AMR][1000 genomes]
rs62434402	1.00[AMR][1000 genomes]
rs62434404	1.00[ASN][1000 genomes]
rs62434411	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62434420	1.00[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs62434424	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62434804	1.00[AMR][1000 genomes]
rs62434806	1.00[AMR][1000 genomes]
rs62434827	1.00[AMR][1000 genomes]
rs62434829	1.00[AMR][1000 genomes]
rs62434831	1.00[AMR][1000 genomes]
rs62434834	1.00[AMR][1000 genomes]
rs62434835	1.00[AMR][1000 genomes]
rs62434836	1.00[AMR][1000 genomes]
rs62434841	1.00[AMR][1000 genomes]
rs62434853	1.00[AMR][1000 genomes]
rs62434854	1.00[AMR][1000 genomes]
rs62434855	1.00[AMR][1000 genomes]
rs72501711	1.00[AMR][1000 genomes]
rs72501713	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9497659	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830838	chr6:147090745-147274669	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147150200-147162200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr6:147153200-147154800	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr6:147154600-147157200	Weak transcription	HUES64 Cell Line	embryonic stem cell

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