Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs1003272	0.90[EUR][1000 genomes]
rs10515435	1.00[EUR][1000 genomes]
rs17133737	1.00[EUR][1000 genomes]
rs17133745	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs17133824	1.00[EUR][1000 genomes]
rs17133845	1.00[EUR][1000 genomes]
rs17133847	1.00[EUR][1000 genomes]
rs17133862	1.00[EUR][1000 genomes]
rs17133873	1.00[CEU][hapmap];0.81[JPT][hapmap];1.00[EUR][1000 genomes]
rs17133882	1.00[CEU][hapmap];0.81[JPT][hapmap];1.00[EUR][1000 genomes]
rs17133892	1.00[EUR][1000 genomes]
rs34926	0.90[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs506401	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57342469	1.00[EUR][1000 genomes]
rs575328	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58429198	1.00[EUR][1000 genomes]
rs59874488	1.00[EUR][1000 genomes]
rs60095412	0.90[EUR][1000 genomes]
rs605747	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61169291	1.00[EUR][1000 genomes]
rs649429	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs657736	1.00[EUR][1000 genomes]
rs6594547	1.00[EUR][1000 genomes]
rs7701160	1.00[EUR][1000 genomes]
rs7706739	1.00[EUR][1000 genomes]
rs7708380	1.00[EUR][1000 genomes]
rs7708790	1.00[EUR][1000 genomes]
rs7719956	1.00[EUR][1000 genomes]
rs7723663	1.00[EUR][1000 genomes]
rs7728161	1.00[EUR][1000 genomes]
rs7737873	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv599367	chr5:110924280-111602713	Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:111267200-111278600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr5:111269000-111278000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr5:111269200-111278000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr5:111269400-111277400	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr5:111269400-111277400	Weak transcription	NHDF-Ad	bronchial
6	chr5:111272800-111278400	Weak transcription	NHEK	skin
7	chr5:111273800-111277400	Weak transcription	NHLF	lung
8	chr5:111273800-111278000	Weak transcription	Osteobl	bone
9	chr5:111273800-111281400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr5:111274000-111278000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr5:111274000-111278200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr5:111274200-111278000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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