Variant report

Variant	rs6441124
Chromosome Location	chr3:157058133-157058134
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs1027603	0.86[ASN][1000 genomes]
rs12496879	0.86[ASN][1000 genomes]
rs12629552	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1500916	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1500919	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1500920	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1546261	0.84[ASN][1000 genomes]
rs1568609	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2047649	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4680358	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6780399	0.84[ASN][1000 genomes]
rs6801110	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7631556	0.86[ASN][1000 genomes]
rs885094	0.84[ASN][1000 genomes]
rs9857875	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs988587	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs988588	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9990136	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:157041000-157065600	Weak transcription	Pancreas	Pancrea
2	chr3:157054800-157065200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr3:157055800-157065600	Weak transcription	Osteobl	bone
4	chr3:157056200-157072600	Weak transcription	HUVEC	blood vessel
5	chr3:157057000-157072800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr3:157057400-157065200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr3:157057600-157058800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr3:157058000-157058200	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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