Variant report
Variant | rs6478032 |
---|---|
Chromosome Location | chr9:116524006-116524007 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
(count:1 , 50 per page) page:
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No data |
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Variant related genes | Relation type |
---|---|
ENSG00000214669 | TF binding region |
rs_ID | r2[population] |
---|---|
rs10513213 | 0.87[AMR][1000 genomes] |
rs16908270 | 1.00[EUR][1000 genomes] |
rs16908588 | 1.00[EUR][1000 genomes] |
rs1961625 | 1.00[EUR][1000 genomes] |
rs41276825 | 1.00[EUR][1000 genomes] |
rs56015224 | 1.00[EUR][1000 genomes] |
rs57815034 | 1.00[EUR][1000 genomes] |
rs59067972 | 1.00[EUR][1000 genomes] |
rs59095451 | 1.00[EUR][1000 genomes] |
rs61299217 | 1.00[EUR][1000 genomes] |
rs6478033 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs7039786 | 1.00[EUR][1000 genomes] |
rs73546467 | 1.00[EUR][1000 genomes] |
rs73548592 | 1.00[EUR][1000 genomes] |
rs73550441 | 1.00[EUR][1000 genomes] |
rs7860886 | 0.87[AMR][1000 genomes] |
rs7871297 | 0.87[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv430093 | chr9:116330446-117325446 | Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 165 gene(s) | inside rSNPs | diseases |
No data |