Variant report

Variant	rs6482284
Chromosome Location	chr10:23764185-23764186
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 70 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:69)

rs_ID	r²[population]
rs10828465	0.87[EUR][1000 genomes]
rs10828466	0.87[EUR][1000 genomes]
rs10828467	0.84[EUR][1000 genomes]
rs11013470	0.84[EUR][1000 genomes]
rs11013499	0.81[JPT][hapmap];0.80[ASN][1000 genomes]
rs11013500	0.80[ASN][1000 genomes]
rs11013502	0.94[ASN][1000 genomes]
rs11013514	0.82[ASN][1000 genomes]
rs11013520	0.95[CEU][hapmap];0.87[JPT][hapmap];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11013531	0.84[EUR][1000 genomes]
rs11013540	0.81[EUR][1000 genomes]
rs11013541	0.82[EUR][1000 genomes]
rs12254275	0.81[EUR][1000 genomes]
rs12261799	0.82[EUR][1000 genomes]
rs12263327	0.81[EUR][1000 genomes]
rs12266853	0.86[EUR][1000 genomes]
rs12358270	0.80[ASN][1000 genomes]
rs12767397	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12780687	0.83[ASN][1000 genomes]
rs1546521	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs16923263	0.80[ASN][1000 genomes]
rs1877324	0.81[EUR][1000 genomes]
rs1877325	0.84[EUR][1000 genomes]
rs1877326	0.84[EUR][1000 genomes]
rs1877327	0.84[EUR][1000 genomes]
rs1877328	0.84[EUR][1000 genomes]
rs2036922	0.96[ASN][1000 genomes]
rs2055920	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2055921	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2055922	0.82[ASN][1000 genomes]
rs2055923	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2366161	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2366162	0.94[EUR][1000 genomes]
rs2886588	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs35256322	0.93[ASN][1000 genomes]
rs4333914	0.95[CEU][hapmap];0.87[JPT][hapmap];0.88[TSI][hapmap];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4427471	0.92[ASN][1000 genomes]
rs4747477	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4747478	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4748896	0.90[EUR][1000 genomes]
rs4748897	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4748898	1.00[CEU][hapmap];1.00[TSI][hapmap];0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4748902	0.90[EUR][1000 genomes]
rs4990826	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6415970	0.93[ASN][1000 genomes]
rs6482285	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6482286	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6482290	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7071059	0.82[EUR][1000 genomes]
rs7073367	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7079051	0.90[ASN][1000 genomes]
rs7083824	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7083923	0.86[EUR][1000 genomes]
rs7085009	0.81[EUR][1000 genomes]
rs7085999	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7087736	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7089300	0.81[EUR][1000 genomes]
rs7899130	0.85[EUR][1000 genomes]
rs7900252	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7901238	0.87[EUR][1000 genomes]
rs7903159	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7904301	0.90[EUR][1000 genomes]
rs7909322	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7913300	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7917515	0.81[EUR][1000 genomes]
rs7918459	0.96[ASN][1000 genomes]
rs7920535	0.83[TSI][hapmap]
rs907451	0.81[TSI][hapmap]
rs962705	0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831811	chr10:23734326-23913370	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23763400-23764600	Enhancers	Primary neutrophils fromperipheralblood	blood

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