Variant report

No.	Distal block	Cell Line	Cell type
1	chr1:172424018..172425586-chr1:172428604..172431117,2	MCF-7	breast:
2	chr1:172426591..172429561-chr1:172505407..172507168,2	K562	blood:
3	chr1:172427186..172429187-chr1:172494410..172497068,2	K562	blood:
4	chr1:172427216..172431593-chr1:172433461..172437861,5	MCF-7	breast:
5	chr1:172424634..172428782-chr1:172501344..172503706,6	K562	blood:
6	chr1:172426679..172428842-chr1:172434307..172436008,2	K562	blood:
7	chr1:172428539..172433124-chr1:172502239..172505220,5	MCF-7	breast:

Variant related genes	Relation type
ENSG00000094975	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10752953	0.93[CEU][hapmap]
rs17277932	1.00[AFR][1000 genomes]
rs2001131	0.90[CEU][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2032531	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2051628	0.93[CEU][hapmap];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2157451	0.93[CEU][hapmap];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2213739	0.92[CEU][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2230471	0.93[CEU][hapmap];0.93[EUR][1000 genomes]
rs2422139	0.93[CEU][hapmap]
rs2422142	0.87[CEU][hapmap];0.88[EUR][1000 genomes]
rs4916256	0.93[CEU][hapmap]
rs4916259	0.93[CEU][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6659116	0.85[EUR][1000 genomes]
rs6660051	0.93[CEU][hapmap]
rs6667786	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6700880	0.93[CEU][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs916365	0.93[CEU][hapmap];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9425314	0.93[CEU][hapmap]
rs9425610	0.81[EUR][1000 genomes]
rs9425618	0.93[CEU][hapmap];0.92[EUR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172422600-172435400	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr1:172423200-172429000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr1:172423200-172429200	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr1:172423400-172434600	Weak transcription	HSMMtube	muscle
5	chr1:172423600-172432000	Weak transcription	Primary neutrophils fromperipheralblood	blood
6	chr1:172425800-172435400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr1:172426000-172436000	Weak transcription	Fetal Intestine Large	intestine
8	chr1:172426400-172434600	Weak transcription	Fetal Muscle Leg	muscle
9	chr1:172427000-172429200	Weak transcription	HepG2	liver
10	chr1:172427200-172429400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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