Variant report

Variant	rs67100311
Chromosome Location	chr3:150205573-150205574
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:150199726..150202135-chr3:150203992..150206473,2	K562	blood:
2	chr3:150180024..150184025-chr3:150205497..150208390,3	K562	blood:

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10513368	0.89[EUR][1000 genomes]
rs10513369	0.87[EUR][1000 genomes]
rs10513370	0.87[EUR][1000 genomes]
rs10513371	0.87[EUR][1000 genomes]
rs10513372	0.87[EUR][1000 genomes]
rs10513375	0.87[EUR][1000 genomes]
rs11713072	0.87[EUR][1000 genomes]
rs11714034	0.90[EUR][1000 genomes]
rs11714123	0.90[EUR][1000 genomes]
rs11916060	0.82[ASN][1000 genomes]
rs11922849	0.82[ASN][1000 genomes]
rs11925759	0.88[EUR][1000 genomes]
rs11928577	0.87[EUR][1000 genomes]
rs11928948	0.87[EUR][1000 genomes]
rs13061361	0.82[ASN][1000 genomes]
rs13066114	0.85[EUR][1000 genomes]
rs13067910	0.88[EUR][1000 genomes]
rs13068946	0.87[EUR][1000 genomes]
rs13076419	0.87[EUR][1000 genomes]
rs13089357	0.87[ASN][1000 genomes]
rs13089766	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13095953	0.82[ASN][1000 genomes]
rs1376027	0.87[EUR][1000 genomes]
rs28571974	0.87[EUR][1000 genomes]
rs2868430	0.87[EUR][1000 genomes]
rs34106738	0.91[EUR][1000 genomes]
rs34419133	0.89[EUR][1000 genomes]
rs34503712	0.87[EUR][1000 genomes]
rs34647320	0.86[EUR][1000 genomes]
rs34983941	0.87[EUR][1000 genomes]
rs35019980	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35310473	0.82[ASN][1000 genomes]
rs35408555	0.87[ASN][1000 genomes]
rs35598887	0.82[EUR][1000 genomes]
rs3749400	0.87[EUR][1000 genomes]
rs61734437	0.84[EUR][1000 genomes]
rs66816665	0.87[EUR][1000 genomes]
rs67073112	0.87[EUR][1000 genomes]
rs6791546	0.87[EUR][1000 genomes]
rs6799106	0.87[EUR][1000 genomes]
rs6799981	0.87[EUR][1000 genomes]
rs73165716	0.87[EUR][1000 genomes]
rs73167540	0.84[EUR][1000 genomes]
rs7614772	0.87[EUR][1000 genomes]
rs7617865	0.82[ASN][1000 genomes]
rs7623100	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877645	chr3:150103135-150212698	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
2	nsv532662	chr3:150180747-150633414	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	101 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:150188200-150218800	Weak transcription	HSMM	muscle
2	chr3:150199000-150212400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr3:150204800-150205800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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