The 2.0 version of rSNPBase

Variant report

Variant rs6738490
Chromosome Location chr2:234161583-234161584
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234159800-234161600 Active TSS ES-I3 Cell Line embryonic stem cell
2 chr2:234159800-234161600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
3 chr2:234159800-234161600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
4 chr2:234159800-234161600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr2:234159800-234161600 Active TSS Right Atrium heart
6 chr2:234159800-234161600 Active TSS Stomach Mucosa stomach
7 chr2:234159800-234161600 Active TSS NHDF-Ad bronchial
8 chr2:234159800-234161600 Active TSS NHLF lung
9 chr2:234159800-234161800 Active TSS H9 Cell Line embryonic stem cell
10 chr2:234159800-234161800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
11 chr2:234159800-234161800 Active TSS Fetal Intestine Large intestine
12 chr2:234159800-234161800 Active TSS Psoas Muscle Psoas
13 chr2:234160000-234161600 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
14 chr2:234160000-234161600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
15 chr2:234160000-234161600 Active TSS Aorta Aorta
16 chr2:234160000-234161600 Active TSS Hela-S3 cervix
17 chr2:234160000-234161800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr2:234160000-234163800 Active TSS GM12878-XiMat blood
19 chr2:234160200-234161600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr2:234160200-234161600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr2:234160200-234161600 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
22 chr2:234160200-234161800 Active TSS H1 Cell Line embryonic stem cell
23 chr2:234160200-234161800 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr2:234160200-234162000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr2:234160400-234161600 Active TSS ES-WA7 Cell Line embryonic stem cell
26 chr2:234160400-234161600 Bivalent/Poised TSS HepG2 liver
27 chr2:234160400-234161800 Flanking Active TSS Primary B cells from cord blood blood
28 chr2:234160800-234161600 Flanking Active TSS Primary T cells from cord blood blood
29 chr2:234160800-234161600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
30 chr2:234160800-234161600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
31 chr2:234160800-234161600 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
32 chr2:234160800-234161600 Flanking Active TSS Adipose Nuclei Adipose
33 chr2:234160800-234161600 Flanking Active TSS Skeletal Muscle Female skeletal muscle
34 chr2:234160800-234161800 Flanking Active TSS Primary hematopoietic stem cells blood
35 chr2:234160800-234161800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr2:234160800-234161800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr2:234160800-234161800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
38 chr2:234160800-234161800 Flanking Active TSS Brain Angular Gyrus brain
39 chr2:234160800-234161800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
40 chr2:234160800-234162000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr2:234161000-234161600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
42 chr2:234161000-234161600 Flanking Active TSS Brain Hippocampus Middle brain
43 chr2:234161000-234161600 Flanking Active TSS Brain Substantia Nigra brain
44 chr2:234161000-234161600 Flanking Active TSS Fetal Muscle Leg muscle
45 chr2:234161000-234161800 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
46 chr2:234161000-234161800 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
47 chr2:234161000-234161800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
48 chr2:234161000-234161800 Flanking Active TSS Liver Liver
49 chr2:234161000-234161800 Flanking Active TSS Brain Cingulate Gyrus brain
50 chr2:234161000-234161800 Flanking Active TSS Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015