Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs11128114	0.83[EUR][1000 genomes]
rs4407408	0.83[EUR][1000 genomes]
rs4425262	0.83[EUR][1000 genomes]
rs4446215	1.00[EUR][1000 genomes]
rs4461426	0.83[EUR][1000 genomes]
rs4504171	0.83[EUR][1000 genomes]
rs4522769	0.83[EUR][1000 genomes]
rs4560302	0.83[EUR][1000 genomes]
rs4563416	0.83[EUR][1000 genomes]
rs4621333	0.83[EUR][1000 genomes]
rs57774890	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs58181265	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58860053	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61006449	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6779055	1.00[EUR][1000 genomes]
rs6792358	0.83[EUR][1000 genomes]
rs6797538	1.00[EUR][1000 genomes]
rs72924899	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72924901	1.00[EUR][1000 genomes]
rs72926297	0.83[EUR][1000 genomes]
rs72926723	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72926734	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7635939	1.00[EUR][1000 genomes]
rs7638543	1.00[EUR][1000 genomes]
rs9883017	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876933	chr3:69059023-69227379	Enhancers Strong transcription Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:69194400-69200600	Weak transcription	Psoas Muscle	Psoas

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