Variant report

Variant	rs6822239
Chromosome Location	chr4:174273220-174273221
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:174253509..174260345-chr4:174271547..174278319,12	K562	blood:
2	chr4:174253971..174257156-chr4:174272482..174275075,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000164104	Chromatin interaction

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10005846	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10019585	1.00[ASN][1000 genomes]
rs10213665	1.00[ASN][1000 genomes]
rs10866367	1.00[ASN][1000 genomes]
rs11723871	1.00[ASN][1000 genomes]
rs12504141	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs12505441	1.00[ASN][1000 genomes]
rs1383629	1.00[ASN][1000 genomes]
rs1585947	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1585948	1.00[ASN][1000 genomes]
rs1947878	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1987522	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2062018	0.88[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2288245	1.00[ASN][1000 genomes]
rs2332670	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2332671	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4645199	1.00[ASN][1000 genomes]
rs4695831	1.00[ASN][1000 genomes]
rs4695832	0.94[ASN][1000 genomes]
rs4695833	1.00[ASN][1000 genomes]
rs4696057	1.00[ASN][1000 genomes]
rs4696058	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4696059	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4696060	1.00[ASN][1000 genomes]
rs4696062	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4696063	0.88[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6826267	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6849068	0.88[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7655155	1.00[ASN][1000 genomes]
rs7670317	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7696310	0.88[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs7698574	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7699673	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs965931	1.00[ASN][1000 genomes]
rs965932	1.00[ASN][1000 genomes]
rs967379	1.00[ASN][1000 genomes]
rs9996063	1.00[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:174256800-174280400	Weak transcription	Aorta	Aorta
2	chr4:174259200-174290400	Weak transcription	Thymus	Thymus
3	chr4:174265400-174278200	Weak transcription	Ovary	ovary
4	chr4:174270200-174273800	Weak transcription	Duodenum Smooth Muscle	Duodenum

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