Variant report

Variant	rs7655155
Chromosome Location	chr4:174297926-174297927
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr4:174252933..174259053-chr4:174284716..174299463,25	MCF-7	breast:
2	chr4:174290344..174294404-chr4:174294931..174300321,9	MCF-7	breast:
3	chr4:174254654..174256985-chr4:174295859..174298159,2	K562	blood:
4	chr4:174290827..174294841-chr4:174296621..174299589,3	K562	blood:
5	chr4:174290350..174292327-chr4:174297725..174299589,2	K562	blood:
6	chr4:174248778..174262653-chr4:174278408..174298501,82	K562	blood:

Variant related genes	Relation type
ENSG00000272870	Chromatin interaction
ENSG00000164105	Chromatin interaction
ENSG00000248774	Chromatin interaction
ENSG00000164104	Chromatin interaction

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10005846	0.86[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10019585	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10025290	0.81[EUR][1000 genomes]
rs10213665	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10866367	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11723871	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12504141	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12505441	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1383629	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1585947	0.86[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1585948	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1947878	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1987522	0.81[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2062018	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2288245	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2332670	0.86[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs2332671	0.86[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4645199	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4695831	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4695832	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs4695833	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4696057	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4696058	0.86[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4696059	0.86[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4696060	1.00[ASN][1000 genomes]
rs4696062	0.81[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4696063	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6822239	1.00[ASN][1000 genomes]
rs6826267	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6849068	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7670317	0.81[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7696310	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs7698574	0.86[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7699673	0.81[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs965931	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs965932	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs967379	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9996063	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:88 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:174293400-174299600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr4:174293400-174321800	Weak transcription	Pancreas	Pancrea
3	chr4:174293400-174333200	Weak transcription	Gastric	stomach
4	chr4:174293600-174298000	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr4:174293800-174299400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr4:174294000-174302800	Weak transcription	HUES6 Cell Line	embryonic stem cell
7	chr4:174294000-174323800	Weak transcription	HSMMtube	muscle
8	chr4:174294000-174340400	Weak transcription	Fetal Intestine Large	intestine
9	chr4:174294200-174307600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
10	chr4:174294200-174309600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr4:174294200-174334400	Weak transcription	Right Ventricle	heart
12	chr4:174294200-174341600	Weak transcription	Fetal Intestine Small	intestine
13	chr4:174294400-174298400	Weak transcription	Rectal Mucosa Donor 31	rectum
14	chr4:174294400-174299400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr4:174294400-174299400	Weak transcription	Left Ventricle	heart
16	chr4:174294400-174302800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
17	chr4:174294400-174314200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr4:174294400-174317400	Weak transcription	Lung	lung
19	chr4:174294400-174318600	Weak transcription	Aorta	Aorta
20	chr4:174294400-174320200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
21	chr4:174294400-174322000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
22	chr4:174294400-174324600	Weak transcription	Thymus	Thymus
23	chr4:174294600-174298800	Weak transcription	HUES48 Cell Line	embryonic stem cell
24	chr4:174294600-174299000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
25	chr4:174294600-174299400	Weak transcription	Ovary	ovary
26	chr4:174294600-174300000	Weak transcription	HMEC	breast
27	chr4:174294600-174338000	Weak transcription	Fetal Brain Male	brain
28	chr4:174294800-174298200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr4:174294800-174299400	Weak transcription	Stomach Smooth Muscle	stomach
30	chr4:174294800-174300200	Weak transcription	Hela-S3	cervix
31	chr4:174294800-174300600	Weak transcription	A549	lung
32	chr4:174294800-174302200	Weak transcription	Brain Germinal Matrix	brain
33	chr4:174294800-174302200	Weak transcription	Rectal Mucosa Donor 29	rectum
34	chr4:174294800-174302400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
35	chr4:174294800-174302600	Weak transcription	Rectal Smooth Muscle	rectum
36	chr4:174294800-174318800	Weak transcription	Fetal Brain Female	brain
37	chr4:174294800-174334200	Weak transcription	Primary hematopoietic stem cells	blood
38	chr4:174294800-174336200	Weak transcription	Adipose Nuclei	Adipose
39	chr4:174294800-174341800	Weak transcription	Duodenum Mucosa	Duodenum
40	chr4:174295000-174300000	Weak transcription	HUVEC	blood vessel
41	chr4:174295200-174298200	Weak transcription	HepG2	liver
42	chr4:174295200-174299800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr4:174295200-174301200	Weak transcription	NHLF	lung
44	chr4:174295200-174302800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr4:174295400-174299200	Weak transcription	Fetal Heart	heart
46	chr4:174295400-174300200	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
47	chr4:174295400-174331400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
48	chr4:174295400-174332200	Weak transcription	Muscle Satellite Cultured Cells	--
49	chr4:174295400-174335800	Weak transcription	Skeletal Muscle Female	skeletal muscle
50	chr4:174295800-174298600	Weak transcription	Psoas Muscle	Psoas

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