Variant report

Variant	rs6831328
Chromosome Location	chr4:100637953-100637954
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 57 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:57)

rs_ID	r²[population]
rs1027223	0.97[ASN][1000 genomes]
rs10516445	0.83[CEU][hapmap]
rs10516455	0.97[ASN][1000 genomes]
rs1115721	0.97[ASN][1000 genomes]
rs11722443	0.92[ASN][1000 genomes]
rs11730739	0.84[AFR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11936303	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12639747	0.82[JPT][hapmap]
rs12640222	0.91[ASN][1000 genomes]
rs12642668	0.85[ASN][1000 genomes]
rs12643245	0.92[ASN][1000 genomes]
rs12648843	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13111133	0.84[ASN][1000 genomes]
rs13111603	0.84[ASN][1000 genomes]
rs13112253	0.86[CEU][hapmap];0.84[CHB][hapmap];0.84[AFR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13114983	0.81[ASN][1000 genomes]
rs13118288	0.95[ASN][1000 genomes]
rs13123629	0.95[ASN][1000 genomes]
rs13123690	0.84[AFR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13124255	0.95[CHB][hapmap];0.82[JPT][hapmap];0.95[ASN][1000 genomes]
rs13130068	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13130949	0.95[CEU][hapmap];0.83[EUR][1000 genomes]
rs13150247	0.92[ASN][1000 genomes]
rs1352775	1.00[CEU][hapmap];0.94[CHB][hapmap];0.88[JPT][hapmap];0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1388295	0.95[ASN][1000 genomes]
rs1426734	0.84[ASN][1000 genomes]
rs1491240	0.83[JPT][hapmap]
rs1582793	0.85[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs1586756	0.97[ASN][1000 genomes]
rs1586757	0.98[ASN][1000 genomes]
rs17029269	0.81[ASN][1000 genomes]
rs17029387	0.92[ASN][1000 genomes]
rs1816197	0.93[ASN][1000 genomes]
rs1834659	0.84[ASN][1000 genomes]
rs1948353	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2306986	0.82[JPT][hapmap]
rs2866167	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs35215295	0.97[ASN][1000 genomes]
rs36098323	0.96[ASN][1000 genomes]
rs3792683	0.82[JPT][hapmap]
rs61705069	0.90[ASN][1000 genomes]
rs66931934	0.81[ASN][1000 genomes]
rs6832692	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6840719	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6852647	0.83[EUR][1000 genomes]
rs71614607	0.97[ASN][1000 genomes]
rs7670607	0.94[CHB][hapmap];0.93[ASN][1000 genomes]
rs7675468	0.82[JPT][hapmap]
rs7677213	0.86[EUR][1000 genomes]
rs7677594	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7678142	0.83[JPT][hapmap]
rs7678889	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7688255	0.84[ASN][1000 genomes]
rs7691498	0.85[ASN][1000 genomes]
rs884276	0.82[JPT][hapmap]
rs958868	0.82[JPT][hapmap]
rs991811	0.83[CEU][hapmap]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:100633000-100638200	Weak transcription	Hela-S3	cervix
2	chr4:100635600-100638200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr4:100635800-100638800	Enhancers	Fetal Intestine Large	intestine
4	chr4:100635800-100638800	Enhancers	Fetal Intestine Small	intestine
5	chr4:100636000-100638000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr4:100636000-100638600	Enhancers	Psoas Muscle	Psoas
7	chr4:100636200-100638400	Enhancers	Duodenum Mucosa	Duodenum
8	chr4:100636600-100640600	Weak transcription	Adipose Nuclei	Adipose
9	chr4:100636600-100646600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr4:100636800-100640600	Weak transcription	Cortex derived primary cultured neurospheres	brain
11	chr4:100636800-100641000	Weak transcription	Colon Smooth Muscle	Colon
12	chr4:100637000-100638000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr4:100637000-100638400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr4:100637200-100638000	Enhancers	Lung	lung
15	chr4:100637600-100638600	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr4:100637600-100638600	Enhancers	Skeletal Muscle Female	skeletal muscle
17	chr4:100637800-100638600	Enhancers	H1 Cell Line	embryonic stem cell
18	chr4:100637800-100638600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr4:100637800-100638600	Enhancers	Stomach Smooth Muscle	stomach
20	chr4:100637800-100643400	Weak transcription	Left Ventricle	heart

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