Variant report
| Variant | rs7691498 |
|---|---|
| Chromosome Location | chr4:100652921-100652922 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr4:100483615..100485992-chr4:100651472..100653391,2 | MCF-7 | breast: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000138823 | Chromatin interaction |
| ENSG00000145331 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:43)
| rs_ID | r2[population] |
|---|---|
| rs1027223 | 0.86[ASN][1000 genomes] |
| rs10516455 | 0.86[ASN][1000 genomes] |
| rs1115721 | 0.86[ASN][1000 genomes] |
| rs11722443 | 0.91[ASN][1000 genomes] |
| rs11727560 | 0.80[ASN][1000 genomes] |
| rs11730739 | 0.89[ASN][1000 genomes] |
| rs11936303 | 0.85[ASN][1000 genomes] |
| rs12640222 | 0.87[ASN][1000 genomes] |
| rs12642668 | 0.98[ASN][1000 genomes] |
| rs12643245 | 0.91[ASN][1000 genomes] |
| rs12648843 | 0.89[ASN][1000 genomes] |
| rs13111133 | 0.99[ASN][1000 genomes] |
| rs13111603 | 0.99[ASN][1000 genomes] |
| rs13112253 | 0.89[ASN][1000 genomes] |
| rs13118288 | 0.83[ASN][1000 genomes] |
| rs13123629 | 0.83[ASN][1000 genomes] |
| rs13123690 | 0.89[ASN][1000 genomes] |
| rs13124255 | 0.83[ASN][1000 genomes] |
| rs13130068 | 0.85[ASN][1000 genomes] |
| rs13150247 | 0.91[ASN][1000 genomes] |
| rs1352775 | 0.82[ASN][1000 genomes] |
| rs1388295 | 0.85[ASN][1000 genomes] |
| rs1426734 | 0.99[ASN][1000 genomes] |
| rs1582793 | 0.90[ASN][1000 genomes] |
| rs1586756 | 0.86[ASN][1000 genomes] |
| rs1586757 | 0.87[ASN][1000 genomes] |
| rs17029387 | 0.91[ASN][1000 genomes] |
| rs1816197 | 0.90[ASN][1000 genomes] |
| rs1834659 | 0.99[ASN][1000 genomes] |
| rs1948353 | 0.85[ASN][1000 genomes] |
| rs2866167 | 0.86[ASN][1000 genomes] |
| rs35215295 | 0.86[ASN][1000 genomes] |
| rs36098323 | 0.87[ASN][1000 genomes] |
| rs61705069 | 0.93[ASN][1000 genomes] |
| rs6831328 | 0.85[ASN][1000 genomes] |
| rs6832692 | 0.85[ASN][1000 genomes] |
| rs6840719 | 0.82[ASN][1000 genomes] |
| rs71614607 | 0.86[ASN][1000 genomes] |
| rs71614613 | 0.81[ASN][1000 genomes] |
| rs7670607 | 1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs7677594 | 0.86[ASN][1000 genomes] |
| rs7678889 | 0.81[ASN][1000 genomes] |
| rs7688255 | 0.99[ASN][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
