The 2.0 version of rSNPBase

Variant report

Variant rs689461
Chromosome Location chr16:69759742-69759743
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:69726600-69759800 Weak transcription Psoas Muscle Psoas
2 chr16:69729400-69760000 Weak transcription Brain Germinal Matrix brain
3 chr16:69729400-69760000 Weak transcription Ovary ovary
4 chr16:69730600-69759800 Weak transcription Fetal Brain Female brain
5 chr16:69730800-69759800 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr16:69731800-69759800 Weak transcription Primary B cells from cord blood blood
7 chr16:69731800-69759800 Weak transcription Right Ventricle heart
8 chr16:69733800-69759800 Weak transcription Placenta Amnion Placenta Amnion
9 chr16:69738800-69759800 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr16:69739200-69759800 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr16:69741600-69759800 Weak transcription Primary T cells from cord blood blood
12 chr16:69743800-69760000 Weak transcription Fetal Kidney kidney
13 chr16:69744000-69759800 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr16:69745400-69759800 Weak transcription Rectal Smooth Muscle rectum
15 chr16:69747400-69759800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr16:69747400-69759800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr16:69749400-69759800 Weak transcription Brain Angular Gyrus brain
18 chr16:69749400-69760000 Weak transcription Fetal Lung lung
19 chr16:69749600-69760000 Weak transcription Pancreas Pancrea
20 chr16:69749800-69759800 Weak transcription Colon Smooth Muscle Colon
21 chr16:69751600-69760000 Weak transcription Liver Liver
22 chr16:69752400-69759800 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr16:69752400-69759800 Weak transcription Esophagus oesophagus
24 chr16:69752400-69760000 Weak transcription Aorta Aorta
25 chr16:69752600-69759800 Weak transcription Left Ventricle heart
26 chr16:69752600-69760000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr16:69756200-69759800 Enhancers Fetal Intestine Small intestine
28 chr16:69756800-69760600 Active TSS Stomach Mucosa stomach
29 chr16:69758200-69761200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
30 chr16:69758400-69759800 Enhancers Rectal Mucosa Donor 29 rectum
31 chr16:69758600-69759800 Enhancers Cortex derived primary cultured neurospheres brain
32 chr16:69758600-69759800 Enhancers Brain Cingulate Gyrus brain
33 chr16:69758600-69760000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr16:69758600-69760000 Enhancers Primary monocytes fromperipheralblood blood
35 chr16:69758600-69760200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr16:69758600-69760200 Flanking Active TSS HSMM muscle
37 chr16:69758600-69760200 Flanking Active TSS HUVEC blood vessel
38 chr16:69758600-69760200 Flanking Active TSS K562 blood
39 chr16:69758600-69760200 Flanking Active TSS NHEK skin
40 chr16:69758600-69760200 Flanking Active TSS Osteobl bone
41 chr16:69758600-69761400 Flanking Active TSS Adipose Nuclei Adipose
42 chr16:69758600-69762600 Active TSS ES-I3 Cell Line embryonic stem cell
43 chr16:69758800-69759800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr16:69758800-69759800 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
45 chr16:69758800-69759800 Enhancers Primary hematopoietic stem cells short term culture blood
46 chr16:69758800-69759800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
47 chr16:69758800-69759800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
48 chr16:69758800-69759800 Enhancers Skeletal Muscle Male skeletal muscle
49 chr16:69758800-69759800 Enhancers Dnd41 blood
50 chr16:69758800-69760000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015