The 2.0 version of rSNPBase

Variant report

Variant rs72801325
Chromosome Location chr16:69629153-69629154
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:69602000-69633000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr16:69602200-69631600 Weak transcription Pancreas Pancrea
3 chr16:69602200-69643200 Weak transcription Fetal Muscle Leg muscle
4 chr16:69602200-69646600 Weak transcription Primary hematopoietic stem cells blood
5 chr16:69602200-69653600 Weak transcription Fetal Thymus thymus
6 chr16:69602600-69629600 Weak transcription HSMMtube muscle
7 chr16:69602600-69630200 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr16:69602600-69630800 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr16:69602800-69629200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr16:69603000-69647400 Weak transcription Stomach Smooth Muscle stomach
11 chr16:69603200-69629600 Weak transcription NH-A brain
12 chr16:69603600-69629200 Weak transcription HUVEC blood vessel
13 chr16:69603600-69660000 Weak transcription Primary B cells from peripheral blood blood
14 chr16:69605400-69629200 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr16:69605400-69663200 Weak transcription Fetal Muscle Trunk muscle
16 chr16:69605600-69660600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr16:69610600-69629200 Weak transcription Aorta Aorta
18 chr16:69610800-69630800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr16:69610800-69642000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr16:69611000-69629200 Weak transcription HMEC breast
21 chr16:69611200-69645600 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr16:69611800-69629200 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr16:69612400-69643800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr16:69614000-69643200 Weak transcription Colon Smooth Muscle Colon
25 chr16:69614000-69644400 Weak transcription Adipose Nuclei Adipose
26 chr16:69615600-69629200 Weak transcription Muscle Satellite Cultured Cells --
27 chr16:69617600-69653400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr16:69617800-69629200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr16:69617800-69629200 Weak transcription Hela-S3 cervix
30 chr16:69617800-69646600 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr16:69619800-69644800 Weak transcription Rectal Smooth Muscle rectum
32 chr16:69621400-69640200 Weak transcription Fetal Stomach stomach
33 chr16:69622200-69645400 Weak transcription Spleen Spleen
34 chr16:69622400-69642000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr16:69622600-69644400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr16:69623800-69646800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr16:69624000-69633600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr16:69624000-69646800 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr16:69624200-69629200 Weak transcription Fetal Heart heart
40 chr16:69624200-69638200 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr16:69624200-69669600 Weak transcription Ovary ovary
42 chr16:69624800-69631200 Weak transcription GM12878-XiMat blood
43 chr16:69624800-69642200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr16:69626200-69629800 Genic enhancers HepG2 liver
45 chr16:69626200-69632000 Weak transcription Dnd41 blood
46 chr16:69626600-69629200 Enhancers A549 lung
47 chr16:69626800-69629200 Weak transcription Osteobl bone
48 chr16:69627000-69645400 Weak transcription Placenta Placenta
49 chr16:69627200-69629200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr16:69627600-69642800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015