Variant report
| Variant | rs6918190 |
|---|---|
| Chromosome Location | chr6:73314125-73314126 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:35)
| rs_ID | r2[population] |
|---|---|
| rs10085254 | 1.00[ASN][1000 genomes] |
| rs10943047 | 1.00[CEU][hapmap] |
| rs1147534 | 1.00[ASN][1000 genomes] |
| rs1147537 | 1.00[ASN][1000 genomes] |
| rs1147538 | 1.00[ASN][1000 genomes] |
| rs1147540 | 1.00[ASN][1000 genomes] |
| rs11967126 | 1.00[CEU][hapmap] |
| rs1202110 | 1.00[ASN][1000 genomes] |
| rs1202118 | 1.00[ASN][1000 genomes] |
| rs1202120 | 1.00[ASN][1000 genomes] |
| rs1202121 | 1.00[ASN][1000 genomes] |
| rs1202122 | 1.00[ASN][1000 genomes] |
| rs12110561 | 1.00[CEU][hapmap] |
| rs1590801 | 1.00[ASN][1000 genomes] |
| rs16882539 | 1.00[ASN][1000 genomes] |
| rs16882707 | 1.00[CEU][hapmap] |
| rs2039107 | 1.00[CEU][hapmap] |
| rs4311478 | 1.00[CEU][hapmap] |
| rs4403240 | 1.00[CEU][hapmap] |
| rs55739455 | 1.00[ASN][1000 genomes] |
| rs59106883 | 1.00[ASN][1000 genomes] |
| rs6453595 | 1.00[CEU][hapmap] |
| rs6903897 | 1.00[CEU][hapmap] |
| rs6909267 | 1.00[ASN][1000 genomes] |
| rs6924417 | 1.00[CEU][hapmap] |
| rs7746456 | 1.00[CEU][hapmap] |
| rs7749673 | 1.00[CEU][hapmap];1.00[YRI][hapmap] |
| rs867520 | 1.00[CEU][hapmap] |
| rs9293893 | 1.00[CEU][hapmap] |
| rs9442816 | 1.00[ASN][1000 genomes] |
| rs9442819 | 1.00[ASN][1000 genomes] |
| rs9446701 | 1.00[ASN][1000 genomes] |
| rs9446703 | 1.00[ASN][1000 genomes] |
| rs9446704 | 1.00[ASN][1000 genomes] |
| rs9446705 | 1.00[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv1023809 | chr6:73157813-73477997 | Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
| 2 | nsv538303 | chr6:73157813-73477997 | Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
| 3 | esv3347486 | chr6:73283590-73445976 | Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
