Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1384757	0.88[GIH][hapmap];0.89[ASN][1000 genomes]
rs1384758	1.00[ASW][hapmap];0.84[GIH][hapmap];0.80[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs1483401	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1483411	0.84[ASN][1000 genomes]
rs2449589	0.97[AFR][1000 genomes];0.83[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2449590	0.95[ASN][1000 genomes]
rs2449593	0.83[ASN][1000 genomes]
rs2514150	0.83[ASN][1000 genomes]
rs2514151	0.83[ASN][1000 genomes]
rs2514152	0.91[ASN][1000 genomes]
rs2514154	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2514160	0.84[ASN][1000 genomes]
rs2514161	0.83[ASN][1000 genomes]
rs2514162	0.84[ASN][1000 genomes]
rs708240	0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs790349	1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs790350	1.00[ASW][hapmap];0.82[GIH][hapmap];0.95[LWK][hapmap];0.90[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs790364	0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs790365	1.00[ASW][hapmap];0.95[LWK][hapmap];0.81[MKK][hapmap];0.90[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs790370	0.88[JPT][hapmap]
rs960532	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv555608	chr11:83633189-83651102	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83629800-83661800	Weak transcription	Brain Cingulate Gyrus	brain
2	chr11:83639600-83659400	Weak transcription	Ovary	ovary
3	chr11:83649200-83662400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr11:83649400-83650400	Enhancers	Brain Inferior Temporal Lobe	brain
5	chr11:83649800-83650400	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr11:83650000-83650400	Enhancers	iPS-20b Cell Line	embryonic stem cell
7	chr11:83650200-83650400	Enhancers	Brain Hippocampus Middle	brain

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