Variant report

Variant	rs2514154
Chromosome Location	chr11:83655294-83655295
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs1118277	0.80[JPT][hapmap]
rs12418356	0.81[JPT][hapmap]
rs1384749	0.80[JPT][hapmap]
rs1384757	0.94[CHB][hapmap];0.80[JPT][hapmap];0.90[ASN][1000 genomes]
rs1384758	0.89[CHB][hapmap];0.93[JPT][hapmap];0.83[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs1483386	0.80[JPT][hapmap]
rs1483411	0.82[CHB][hapmap];0.86[JPT][hapmap];0.83[ASN][1000 genomes]
rs1545863	0.80[JPT][hapmap]
rs1545864	0.81[JPT][hapmap]
rs1601091	0.80[JPT][hapmap]
rs1601092	0.80[JPT][hapmap]
rs1982733	0.80[JPT][hapmap]
rs2200204	0.80[JPT][hapmap]
rs2449589	0.97[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2449590	0.94[CHB][hapmap];0.87[JPT][hapmap];0.95[ASN][1000 genomes]
rs2449593	0.83[CHB][hapmap];0.86[JPT][hapmap];0.83[ASN][1000 genomes]
rs2449596	0.81[JPT][hapmap]
rs2449597	0.80[JPT][hapmap]
rs2449599	0.80[JPT][hapmap]
rs2449600	0.80[JPT][hapmap]
rs2514145	0.80[JPT][hapmap]
rs2514147	0.81[JPT][hapmap]
rs2514149	0.80[JPT][hapmap]
rs2514150	0.82[ASN][1000 genomes]
rs2514151	0.82[ASN][1000 genomes]
rs2514152	0.94[CHB][hapmap];0.93[JPT][hapmap];0.93[ASN][1000 genomes]
rs2514155	0.81[JPT][hapmap]
rs2514159	0.80[JPT][hapmap]
rs2514160	0.87[CHB][hapmap];0.83[ASN][1000 genomes]
rs2514161	0.83[CHB][hapmap];0.86[JPT][hapmap];0.83[ASN][1000 genomes]
rs2514162	0.82[CHB][hapmap];0.86[JPT][hapmap];0.83[ASN][1000 genomes]
rs708240	0.97[AFR][1000 genomes];0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs708241	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs790349	0.82[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs790350	0.80[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs790364	0.88[CHB][hapmap];0.80[JPT][hapmap];0.83[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs790365	0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.88[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs960532	0.82[CHB][hapmap];0.86[JPT][hapmap];0.82[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83629800-83661800	Weak transcription	Brain Cingulate Gyrus	brain
2	chr11:83639600-83659400	Weak transcription	Ovary	ovary
3	chr11:83649200-83662400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr11:83650400-83662400	Weak transcription	Brain Hippocampus Middle	brain

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