Variant report
| Variant | rs7112450 |
|---|---|
| Chromosome Location | chr11:34037096-34037097 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:4)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:4 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr11:34030524..34032316-chr11:34034939..34037311,2 | K562 | blood: | |
| 2 | chr11:34035462..34037651-chr11:34072261..34075519,3 | MCF-7 | breast: | |
| 3 | chr11:34034770..34037468-chr11:34039227..34043308,3 | K562 | blood: | |
| 4 | chr11:34035968..34037772-chr11:34038826..34040727,2 | K562 | blood: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000135387 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:14)
| rs_ID | r2[population] |
|---|---|
| rs10836150 | 0.91[EUR][1000 genomes] |
| rs2421459 | 0.93[EUR][1000 genomes] |
| rs28768368 | 0.86[EUR][1000 genomes] |
| rs36117528 | 0.81[EUR][1000 genomes] |
| rs4756095 | 0.96[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs4756096 | 0.89[EUR][1000 genomes] |
| rs4756101 | 0.82[EUR][1000 genomes] |
| rs57636521 | 0.84[EUR][1000 genomes] |
| rs6484694 | 0.81[EUR][1000 genomes] |
| rs7104352 | 0.84[EUR][1000 genomes] |
| rs7112219 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7122992 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73497030 | 0.81[EUR][1000 genomes] |
| rs7940096 | 0.92[AMR][1000 genomes];0.98[EUR][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
