Variant report
| Variant | rs7122992 |
|---|---|
| Chromosome Location | chr11:34036683-34036684 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:4)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:4 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr11:34030524..34032316-chr11:34034939..34037311,2 | K562 | blood: | |
| 2 | chr11:34035462..34037651-chr11:34072261..34075519,3 | MCF-7 | breast: | |
| 3 | chr11:34034770..34037468-chr11:34039227..34043308,3 | K562 | blood: | |
| 4 | chr11:34035968..34037772-chr11:34038826..34040727,2 | K562 | blood: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000135387 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:42)
| rs_ID | r2[population] |
|---|---|
| rs10501132 | 0.81[CEU][hapmap] |
| rs10501133 | 0.81[CEU][hapmap] |
| rs10836150 | 0.89[CEU][hapmap];0.91[EUR][1000 genomes] |
| rs16925121 | 0.81[CEU][hapmap] |
| rs16925126 | 0.81[CEU][hapmap] |
| rs16925134 | 0.81[CEU][hapmap] |
| rs16925147 | 0.81[CEU][hapmap] |
| rs16925160 | 0.81[CEU][hapmap] |
| rs16925163 | 0.81[CEU][hapmap] |
| rs16925173 | 0.81[CEU][hapmap] |
| rs16925177 | 0.81[CEU][hapmap] |
| rs16925181 | 0.81[CEU][hapmap] |
| rs16925219 | 0.81[CEU][hapmap] |
| rs17699505 | 0.81[CEU][hapmap] |
| rs17700877 | 0.81[CEU][hapmap] |
| rs17701015 | 0.81[CEU][hapmap] |
| rs17778417 | 0.81[CEU][hapmap] |
| rs1883958 | 0.81[CEU][hapmap] |
| rs2421459 | 0.89[CEU][hapmap];0.93[EUR][1000 genomes] |
| rs2467393 | 0.81[CEU][hapmap] |
| rs2473932 | 0.81[CEU][hapmap] |
| rs28768368 | 0.86[EUR][1000 genomes] |
| rs2957481 | 0.81[CEU][hapmap] |
| rs2982617 | 0.81[CEU][hapmap] |
| rs36117528 | 0.81[EUR][1000 genomes] |
| rs4237663 | 0.81[CEU][hapmap] |
| rs4755359 | 0.81[CEU][hapmap] |
| rs4756095 | 1.00[CEU][hapmap];0.86[YRI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs4756096 | 0.89[EUR][1000 genomes] |
| rs4756101 | 0.82[EUR][1000 genomes] |
| rs57636521 | 0.84[EUR][1000 genomes] |
| rs6484694 | 0.81[EUR][1000 genomes] |
| rs7104352 | 0.84[EUR][1000 genomes] |
| rs7112219 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7112450 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73497030 | 0.81[EUR][1000 genomes] |
| rs7483997 | 0.81[CEU][hapmap] |
| rs7925527 | 0.81[CEU][hapmap] |
| rs7933297 | 0.81[CEU][hapmap] |
| rs7940096 | 0.92[AMR][1000 genomes];0.98[EUR][1000 genomes] |
| rs7944654 | 0.81[CEU][hapmap] |
| rs8191 | 0.81[CEU][hapmap] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:34035000-34036800 | Enhancers | Fetal Intestine Large | intestine |
| 2 | chr11:34035200-34036800 | Enhancers | Fetal Intestine Small | intestine |
