Variant report

Variant	rs7128833
Chromosome Location	chr11:74738440-74738441
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:74699633..74701295-chr11:74736217..74739161,2	K562	blood:

Variant related genes	Relation type
ENSG00000162139	Chromatin interaction

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs11236291	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11236292	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12287793	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3018833	0.89[ASN][1000 genomes]
rs487226	0.81[JPT][hapmap]
rs493001	0.81[JPT][hapmap]
rs494474	0.94[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs4944962	0.81[JPT][hapmap]
rs514534	0.81[JPT][hapmap]
rs517666	0.81[JPT][hapmap]
rs522808	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs536412	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs544115	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs551371	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs565377	0.94[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs566480	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs568310	0.91[ASN][1000 genomes]
rs58778107	0.96[ASN][1000 genomes]
rs58972415	0.85[ASN][1000 genomes]
rs59860682	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs605954	0.81[JPT][hapmap]
rs629191	0.81[JPT][hapmap]
rs639768	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs650130	0.81[JPT][hapmap]
rs662062	0.81[JPT][hapmap]
rs670246	0.81[JPT][hapmap]
rs671544	0.95[CEU][hapmap];0.86[JPT][hapmap];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs674122	0.93[ASN][1000 genomes]
rs681566	0.82[CHB][hapmap];0.86[JPT][hapmap];0.90[ASN][1000 genomes]
rs685116	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7939123	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7952096	0.89[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7952209	0.83[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:74726600-74746400	Weak transcription	GM12878-XiMat	blood
2	chr11:74734400-74742200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr11:74734600-74739000	Weak transcription	Psoas Muscle	Psoas
4	chr11:74735000-74739200	Weak transcription	NHDF-Ad	bronchial
5	chr11:74735200-74741600	Weak transcription	Left Ventricle	heart
6	chr11:74735400-74738600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr11:74735400-74742400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr11:74736400-74741800	Weak transcription	Brain Angular Gyrus	brain
9	chr11:74736400-74741800	Weak transcription	Brain Substantia Nigra	brain
10	chr11:74736400-74741800	Weak transcription	Fetal Intestine Large	intestine
11	chr11:74736600-74738800	Weak transcription	Skeletal Muscle Male	skeletal muscle
12	chr11:74736600-74742200	Weak transcription	Fetal Intestine Small	intestine
13	chr11:74737800-74739800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
14	chr11:74737800-74741600	Enhancers	K562	blood
15	chr11:74738200-74743200	Enhancers	Skeletal Muscle Female	skeletal muscle
16	chr11:74738400-74739600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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