Variant report

Variant rs72132513
Chromosome Location chr19:53361484-53361485
allele -/CTTT/TCTT
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53360000-53361600 Active TSS HUES48 Cell Line embryonic stem cell
2 chr19:53360000-53361600 Active TSS Fetal Thymus thymus
3 chr19:53360000-53361600 Active TSS Psoas Muscle Psoas
4 chr19:53360000-53361600 Active TSS Right Ventricle heart
5 chr19:53360000-53361600 Active TSS Stomach Smooth Muscle stomach
6 chr19:53360000-53361800 Active TSS HUES6 Cell Line embryonic stem cell
7 chr19:53360000-53361800 Active TSS iPS-15b Cell Line embryonic stem cell
8 chr19:53360000-53361800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr19:53360000-53361800 Active TSS Brain Hippocampus Middle brain
10 chr19:53360000-53361800 Active TSS Brain Inferior Temporal Lobe brain
11 chr19:53360000-53361800 Active TSS Duodenum Smooth Muscle Duodenum
12 chr19:53360000-53361800 Active TSS Fetal Intestine Large intestine
13 chr19:53360000-53361800 Active TSS Fetal Intestine Small intestine
14 chr19:53360000-53361800 Active TSS Thymus Thymus
15 chr19:53360200-53361600 Active TSS Brain Substantia Nigra brain
16 chr19:53360200-53361800 Active TSS Brain Anterior Caudate brain
17 chr19:53360200-53361800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
18 chr19:53360200-53361800 Active TSS Pancreas Pancrea
19 chr19:53360200-53361800 Active TSS Right Atrium heart
20 chr19:53360400-53361800 Active TSS Brain Cingulate Gyrus brain
21 chr19:53360400-53361800 Active TSS Fetal Kidney kidney
22 chr19:53360400-53361800 Active TSS Skeletal Muscle Male skeletal muscle
23 chr19:53361000-53361600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr19:53361000-53361600 Flanking Active TSS Fetal Muscle Trunk muscle
25 chr19:53361000-53361600 Flanking Active TSS Placenta Placenta
26 chr19:53361000-53361600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
27 chr19:53361000-53361800 Flanking Active TSS Primary T cells fromperipheralblood blood
28 chr19:53361000-53361800 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
29 chr19:53361000-53361800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr19:53361200-53361600 Flanking Active TSS Primary B cells from peripheral blood blood
31 chr19:53361400-53361600 Enhancers Primary B cells from cord blood blood
32 chr19:53361400-53361600 Enhancers Primary hematopoietic stem cells blood
33 chr19:53361400-53361600 Active TSS Primary T helper cells PMA-I stimulated --
34 chr19:53361400-53361600 Active TSS Primary T helper cells fromperipheralblood blood
35 chr19:53361400-53361600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
36 chr19:53361400-53361600 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr19:53361400-53361800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
38 chr19:53361400-53361800 Active TSS Primary monocytes fromperipheralblood blood
39 chr19:53361400-53361800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
40 chr19:53361400-53361800 Active TSS Adipose Nuclei Adipose
41 chr19:53361400-53361800 Active TSS Colonic Mucosa Colon
42 chr19:53361400-53361800 Enhancers Fetal Brain Male brain
43 chr19:53361400-53361800 Active TSS Fetal Muscle Leg muscle
44 chr19:53361400-53362000 Active TSS Breast Myoepithelial Primary Cells Breast
45 chr19:53361400-53362000 Enhancers Dnd41 blood
46 chr19:53361400-53363600 Weak transcription K562 blood
47 chr19:53361400-53364800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr19:53361400-53381800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr19:53361400-53381800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr19:53361400-53381800 Weak transcription Cortex derived primary cultured neurospheres brain

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