Variant report

Variant	rs72654754
Chromosome Location	chr6:76458625-76458626
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr6:76458501-76459320	Hela-S3	cervix:	n/a	n/a
2	POLR2A	chr6:76458298-76459186	K562	blood:	n/a	n/a
3	ELK1	chr6:76458544-76458687	GM12878	blood:	n/a	n/a
4	HEY1	chr6:76458316-76459195	K562	blood:	n/a	chr6:76458989-76459004 chr6:76459165-76459180
5	POLR2A	chr6:76458474-76459266	GM12878	blood:	n/a	n/a
6	POLR2A	chr6:76458314-76459450	MCF-7	breast:	n/a	n/a
7	MXI1	chr6:76458216-76459865	SK-N-SH	brain:	n/a	n/a
8	MYC	chr6:76458262-76458728	H1-hESC	embryonic stem cell:	n/a	chr6:76458360-76458370
9	POLR2A	chr6:76458336-76459326	GM15510	blood:	n/a	n/a
10	MAX	chr6:76458237-76459405	ECC-1	luminal epithelium:	n/a	chr6:76458360-76458370
11	POLR2A	chr6:76458226-76459201	Hela-S3	cervix:	n/a	n/a
12	CHD1	chr6:76458458-76458771	H1-hESC	embryonic stem cell:	n/a	chr6:76458550-76458560
13	TCF12	chr6:76458483-76459522	ECC-1	luminal epithelium:	n/a	chr6:76458513-76458520 chr6:76459476-76459485
14	TAF1	chr6:76458360-76459272	ECC-1	luminal epithelium:	n/a	n/a
15	MAX	chr6:76458179-76458750	H1-hESC	embryonic stem cell:	n/a	chr6:76458360-76458370
16	POLR2A	chr6:76458304-76459589	H1-neurons	neurons:	n/a	n/a
17	SMC3	chr6:76458431-76459181	Hela-S3	cervix:	n/a	n/a
18	KAP1	chr6:76458012-76458765	U2OS	brain:	n/a	n/a
19	CCNT2	chr6:76458398-76459210	K562	blood:	n/a	n/a
20	BACH1	chr6:76458435-76458631	K562	blood:	n/a	n/a
21	POLR2A	chr6:76458422-76459217	Hela-S3	cervix:	n/a	n/a
22	RCOR1	chr6:76458484-76459228	HepG2	liver:	n/a	n/a
23	POLR2A	chr6:76458007-76459692	H1-hESC	embryonic stem cell:	n/a	n/a
24	POLR2A	chr6:76457987-76459456	GM19099	blood:	n/a	n/a
25	PML	chr6:76458237-76458866	K562	blood:	n/a	n/a
26	MYC	chr6:76458205-76459182	K562	blood:	n/a	chr6:76458360-76458370
27	MAX	chr6:76458183-76459248	A549	lung:	n/a	chr6:76458360-76458370
28	GTF2F1	chr6:76458313-76459050	H1-hESC	embryonic stem cell:	n/a	n/a
29	TBL1XR1	chr6:76458198-76458753	K562	blood:	n/a	n/a
30	ELF1	chr6:76458271-76459453	GM12878	blood:	n/a	chr6:76458494-76458503 chr6:76459108-76459117 chr6:76459104-76459116
31	POLR2A	chr6:76458257-76459202	H1-hESC	embryonic stem cell:	n/a	n/a
32	POLR2A	chr6:76458389-76459275	HCT-116	colon:	n/a	n/a
33	ZNF263	chr6:76458339-76460343	HEK293-T-REx	kidney:	n/a	n/a
34	RFX5	chr6:76458590-76459154	Hela-S3	cervix:	n/a	n/a
35	POLR2A	chr6:76458274-76459155	K562	blood:	n/a	n/a
36	POLR2A	chr6:76458251-76459418	GM18526	blood:	n/a	n/a
37	CEBPB	chr6:76458284-76459143	Hela-S3	cervix:	n/a	n/a
38	SIN3A	chr6:76458322-76459605	H1-hESC	embryonic stem cell:	n/a	chr6:76458744-76458755 chr6:76459003-76459016 chr6:76458723-76458736
39	BACH1	chr6:76458387-76458719	H1-hESC	embryonic stem cell:	n/a	n/a
40	MAZ	chr6:76458372-76459317	Hela-S3	cervix:	n/a	n/a
41	TAF1	chr6:76458613-76459367	HepG2	liver:	n/a	n/a
42	RAD21	chr6:76458399-76459210	H1-hESC	embryonic stem cell:	n/a	n/a
43	ZEB1	chr6:76458204-76459519	GM12878	blood:	n/a	n/a
44	HA-E2F1	chr6:76458362-76459116	Hela-S3	cervix:	n/a	chr6:76459105-76459114 chr6:76459106-76459116
45	POLR2A	chr6:76458578-76458826	HepG2	liver:	n/a	n/a
46	TAF1	chr6:76458353-76459110	SK-N-SH	brain:	n/a	n/a
47	RELA	chr6:76458470-76459424	GM19099	blood:	n/a	n/a
48	POLR2A	chr6:76458605-76459140	A549	lung:	n/a	n/a
49	RCOR1	chr6:76458343-76459322	K562	blood:	n/a	n/a
50	POLR2A	chr6:76458196-76459439	GM19193	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:76311833..76313694-chr6:76456932..76459481,3	MCF-7	breast:
2	chr6:76310925..76313590-chr6:76457201..76459634,2	K562	blood:
3	chr6:76457017..76459821-chr6:76526945..76528874,2	MCF-7	breast:
4	chr11:93474252..93474772-chr6:76458412..76459090,2	Hela-S3	cervix:
5	chr6:76457060..76461197-chr6:76473704..76478813,6	MCF-7	breast:
6	chr3:141205080..141206779-chr6:76458156..76460847,2	MCF-7	breast:
7	chr6:41039866..41042611-chr6:76456761..76459603,2	MCF-7	breast:

Variant related genes	Relation type
MYO6	TF binding region
ENSG00000252156	Chromatin interaction
ENSG00000166012	Chromatin interaction
ENSG00000112701	Chromatin interaction
ENSG00000196586	Chromatin interaction
ENSG00000124596	Chromatin interaction
ENSG00000155903	Chromatin interaction
ENSG00000182919	Chromatin interaction
ENSG00000001167	Chromatin interaction

Extended variants
information (count: 162 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:135)

rs_ID	r²[population]
rs11963710	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11964201	0.91[ASN][1000 genomes]
rs11967411	0.91[ASN][1000 genomes]
rs11968058	0.91[ASN][1000 genomes]
rs11968226	0.89[ASN][1000 genomes]
rs11969264	0.91[ASN][1000 genomes]
rs12660075	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12660330	0.91[ASN][1000 genomes]
rs12660493	0.91[ASN][1000 genomes]
rs12661973	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12662248	0.96[ASN][1000 genomes]
rs12662475	0.91[ASN][1000 genomes]
rs12662565	0.91[ASN][1000 genomes]
rs12662672	0.91[ASN][1000 genomes]
rs12662718	0.85[ASN][1000 genomes]
rs12662824	0.99[ASN][1000 genomes]
rs12663203	0.91[ASN][1000 genomes]
rs12663535	0.99[ASN][1000 genomes]
rs12664027	0.91[EUR][1000 genomes]
rs12664146	0.87[ASN][1000 genomes]
rs12664721	0.94[ASN][1000 genomes]
rs12664742	0.96[ASN][1000 genomes]
rs12665404	0.87[ASN][1000 genomes]
rs13205059	0.91[ASN][1000 genomes]
rs16879451	0.96[ASN][1000 genomes]
rs2273858	0.87[ASN][1000 genomes]
rs2275114	0.91[EUR][1000 genomes]
rs35780943	0.91[EUR][1000 genomes]
rs3778009	0.86[ASN][1000 genomes]
rs3798436	0.83[ASN][1000 genomes]
rs3798445	0.89[ASN][1000 genomes]
rs3798450	0.91[ASN][1000 genomes]
rs3798451	0.91[ASN][1000 genomes]
rs3798452	0.96[ASN][1000 genomes]
rs3798453	0.96[ASN][1000 genomes]
rs3798456	0.96[ASN][1000 genomes]
rs3798457	0.99[ASN][1000 genomes]
rs56251027	0.89[ASN][1000 genomes]
rs59710688	0.91[ASN][1000 genomes]
rs60360183	0.91[ASN][1000 genomes]
rs61620194	0.91[ASN][1000 genomes]
rs67182025	0.91[ASN][1000 genomes]
rs72654703	0.91[EUR][1000 genomes]
rs72654704	0.91[EUR][1000 genomes]
rs72654705	0.91[EUR][1000 genomes]
rs72654706	0.91[EUR][1000 genomes]
rs72654707	0.91[EUR][1000 genomes]
rs72654708	0.91[EUR][1000 genomes]
rs72654709	0.91[EUR][1000 genomes]
rs72654710	0.82[EUR][1000 genomes]
rs72654711	0.91[EUR][1000 genomes]
rs72654712	0.91[EUR][1000 genomes]
rs72654713	0.91[EUR][1000 genomes]
rs72654716	0.91[EUR][1000 genomes]
rs72654717	0.91[EUR][1000 genomes]
rs72654718	0.91[EUR][1000 genomes]
rs72654719	0.91[EUR][1000 genomes]
rs72654720	0.91[EUR][1000 genomes]
rs72654721	0.91[EUR][1000 genomes]
rs72654722	0.91[EUR][1000 genomes]
rs72654723	0.91[EUR][1000 genomes]
rs72654725	0.91[EUR][1000 genomes]
rs72654727	0.91[EUR][1000 genomes]
rs72654728	0.91[EUR][1000 genomes]
rs72654729	0.91[EUR][1000 genomes]
rs72654730	0.91[EUR][1000 genomes]
rs72654731	0.91[EUR][1000 genomes]
rs72654732	0.91[EUR][1000 genomes]
rs72654733	0.91[EUR][1000 genomes]
rs72654734	0.91[EUR][1000 genomes]
rs72654735	0.91[EUR][1000 genomes]
rs72654736	0.91[EUR][1000 genomes]
rs72654737	0.91[EUR][1000 genomes]
rs72654738	0.91[EUR][1000 genomes]
rs72654739	0.91[EUR][1000 genomes]
rs72654740	0.91[EUR][1000 genomes]
rs72654741	0.91[EUR][1000 genomes]
rs72654742	0.91[EUR][1000 genomes]
rs72654743	0.91[EUR][1000 genomes]
rs72654744	0.91[EUR][1000 genomes]
rs72654745	0.91[EUR][1000 genomes]
rs72654746	0.91[EUR][1000 genomes]
rs72654747	0.91[EUR][1000 genomes]
rs72654748	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72654749	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72654750	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72654751	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72654752	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72654753	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72654755	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72654756	0.99[ASN][1000 genomes]
rs72654757	0.96[ASN][1000 genomes]
rs72654758	0.99[ASN][1000 genomes]
rs72654759	0.96[ASN][1000 genomes]
rs72654760	0.96[ASN][1000 genomes]
rs72654761	0.96[ASN][1000 genomes]
rs72654762	0.93[ASN][1000 genomes]
rs72654763	0.96[ASN][1000 genomes]
rs72654764	0.91[ASN][1000 genomes]
rs72654765	0.91[ASN][1000 genomes]
rs72654766	0.91[ASN][1000 genomes]
rs72654767	0.91[ASN][1000 genomes]
rs72654769	0.91[ASN][1000 genomes]
rs72654770	0.91[ASN][1000 genomes]
rs72654771	0.91[ASN][1000 genomes]
rs72654772	0.91[ASN][1000 genomes]
rs72654773	0.91[ASN][1000 genomes]
rs72654774	0.91[ASN][1000 genomes]
rs72654775	0.91[ASN][1000 genomes]
rs72654776	0.91[ASN][1000 genomes]
rs72654777	0.91[ASN][1000 genomes]
rs72654778	0.91[ASN][1000 genomes]
rs72654779	0.91[ASN][1000 genomes]
rs72654780	0.91[ASN][1000 genomes]
rs72654781	0.87[ASN][1000 genomes]
rs72654783	0.87[ASN][1000 genomes]
rs72654784	0.87[ASN][1000 genomes]
rs72654785	0.87[ASN][1000 genomes]
rs72654786	0.87[ASN][1000 genomes]
rs72654787	0.87[ASN][1000 genomes]
rs72654788	0.83[ASN][1000 genomes]
rs73751021	0.90[ASN][1000 genomes]
rs73751022	0.91[ASN][1000 genomes]
rs73751024	0.91[ASN][1000 genomes]
rs7761217	0.96[ASN][1000 genomes]
rs9443187	0.99[ASN][1000 genomes]
rs9443191	0.91[ASN][1000 genomes]
rs9443192	0.91[ASN][1000 genomes]
rs9447543	0.99[ASN][1000 genomes]
rs9447544	0.99[ASN][1000 genomes]
rs9447545	0.99[ASN][1000 genomes]
rs9447546	0.96[ASN][1000 genomes]
rs9447549	0.96[ASN][1000 genomes]
rs9447552	0.96[ASN][1000 genomes]
rs9447555	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:27 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1027915	chr6:75893542-76510113	Active TSS Enhancers Strong transcription Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
2	nsv538311	chr6:75893542-76510113	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
3	nsv1022428	chr6:76023118-76575620	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	48 gene(s)	inside rSNPs	diseases
4	nsv538312	chr6:76023118-76575620	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	48 gene(s)	inside rSNPs	diseases
5	nsv1032245	chr6:76045537-76545703	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	47 gene(s)	inside rSNPs	diseases
6	nsv538313	chr6:76045537-76545703	Strong transcription Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	47 gene(s)	inside rSNPs	diseases
7	nsv1019328	chr6:76154751-76604197	Enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
8	nsv538314	chr6:76154751-76604197	Enhancers Strong transcription Active TSS Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
9	nsv1023331	chr6:76238459-76482117	Strong transcription ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
10	nsv538315	chr6:76238459-76482117	Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
11	nsv1017542	chr6:76238459-76537447	Strong transcription Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
12	nsv1031745	chr6:76257913-76493355	Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
13	nsv538316	chr6:76257913-76493355	Strong transcription Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
14	nsv533100	chr6:76257914-76493354	Enhancers Weak transcription Strong transcription Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
15	nsv1023749	chr6:76287578-76482117	Weak transcription Flanking Active TSS Genic enhancers Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
16	nsv538317	chr6:76287578-76482117	Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
17	nsv1021090	chr6:76306100-76759397	Weak transcription Enhancers Active TSS Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
18	nsv538318	chr6:76306100-76759397	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
19	nsv886184	chr6:76320846-76462711	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
20	nsv886185	chr6:76320846-76498109	Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
21	nsv886186	chr6:76328955-76469115	Active TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
22	nsv1032961	chr6:76343575-76788852	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
23	nsv932201	chr6:76365548-77219650	Enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
24	nsv886187	chr6:76408950-76469115	Strong transcription Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
25	nsv1028340	chr6:76410921-76960225	Flanking Bivalent TSS/Enh Strong transcription Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
26	nsv538319	chr6:76410921-76960225	Strong transcription Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
27	nsv886188	chr6:76411843-76469115	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:76457600-76460600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr6:76457800-76459600	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
3	chr6:76457800-76460400	Active TSS	ES-I3 Cell Line	embryonic stem cell
4	chr6:76457800-76461000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr6:76458000-76458800	Flanking Bivalent TSS/Enh	Primary B cells from cord blood	blood
6	chr6:76458000-76458800	Flanking Active TSS	HMEC	breast
7	chr6:76458000-76459000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr6:76458000-76459000	Active TSS	Colonic Mucosa	Colon
9	chr6:76458000-76459000	Active TSS	Duodenum Smooth Muscle	Duodenum
10	chr6:76458000-76459400	Active TSS	Hela-S3	cervix
11	chr6:76458000-76459600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr6:76458000-76459600	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
13	chr6:76458000-76459800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
14	chr6:76458000-76459800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells	blood
15	chr6:76458000-76459800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr6:76458000-76459800	Active TSS	Brain Substantia Nigra	brain
17	chr6:76458000-76459800	Active TSS	Fetal Lung	lung
18	chr6:76458000-76459800	Active TSS	NHDF-Ad	bronchial
19	chr6:76458000-76460000	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr6:76458000-76460000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr6:76458000-76460000	Active TSS	Brain Angular Gyrus	brain
22	chr6:76458000-76460000	Active TSS	Colon Smooth Muscle	Colon
23	chr6:76458000-76460000	Active TSS	Stomach Smooth Muscle	stomach
24	chr6:76458000-76460200	Active TSS	ES-WA7 Cell Line	embryonic stem cell
25	chr6:76458000-76460200	Active TSS	H1 Cell Line	embryonic stem cell
26	chr6:76458000-76460200	Active TSS	Rectal Mucosa Donor 31	rectum
27	chr6:76458000-76460200	Active TSS	NHLF	lung
28	chr6:76458000-76460600	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
29	chr6:76458000-76460600	Active TSS	Brain Cingulate Gyrus	brain
30	chr6:76458000-76460600	Active TSS	Rectal Smooth Muscle	rectum
31	chr6:76458000-76460600	Active TSS	Osteobl	bone
32	chr6:76458000-76460800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
33	chr6:76458000-76460800	Active TSS	HUES6 Cell Line	embryonic stem cell
34	chr6:76458000-76460800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
35	chr6:76458000-76461000	Active TSS	Pancreatic Islets	Pancreatic Islet
36	chr6:76458000-76461200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr6:76458000-76461600	Active TSS	Brain Anterior Caudate	brain
38	chr6:76458200-76458800	Flanking Bivalent TSS/Enh	Primary monocytes fromperipheralblood	blood
39	chr6:76458200-76458800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells short term culture	blood
40	chr6:76458200-76459000	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr6:76458200-76459200	Bivalent/Poised TSS	Primary T helper naive cells fromperipheralblood	blood
42	chr6:76458200-76459200	Flanking Bivalent TSS/Enh	Primary mononuclear cells fromperipheralblood	Blood
43	chr6:76458200-76459400	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
44	chr6:76458200-76459400	Active TSS	Rectal Mucosa Donor 29	rectum
45	chr6:76458200-76459600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
46	chr6:76458200-76459600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
47	chr6:76458200-76459600	Active TSS	Left Ventricle	heart
48	chr6:76458200-76459600	Active TSS	Sigmoid Colon	Sigmoid Colon
49	chr6:76458200-76459600	Active TSS	Small Intestine	intestine
50	chr6:76458200-76459800	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived

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