Variant report

Variant	rs72679530
Chromosome Location	chr8:117482198-117482199
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:117479796..117482981-chr8:117484703..117487386,3	K562	blood:
2	chr8:117477155..117480102-chr8:117480224..117482416,2	K562	blood:

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs16888486	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16888499	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16888508	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16888522	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16888589	1.00[ASN][1000 genomes]
rs16892766	1.00[ASN][1000 genomes]
rs56057462	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57606086	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72679518	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72679526	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72679534	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72679537	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72679548	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72679553	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72679555	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72679561	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72679565	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72679567	1.00[ASN][1000 genomes]
rs72679570	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72679582	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72679589	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72679590	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72679593	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72679595	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv527309	chr8:116888468-117563532	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:117479400-117483600	Weak transcription	Pancreatic Islets	Pancreatic Islet

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