Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12119586	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12123454	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12127102	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12130400	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12131906	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12134212	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12135235	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12143046	0.89[EUR][1000 genomes]
rs16841956	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16841988	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3027070	0.80[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs34479145	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72711393	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72711395	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72713608	0.90[AMR][1000 genomes]
rs72713611	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72713644	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72713647	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs72713652	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74125414	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv872487	chr1:159196765-159342439	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv872488	chr1:159218266-159336948	Flanking Active TSS Enhancers Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:159258800-159263000	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr1:159260000-159261800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr1:159260000-159262200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr1:159260200-159262600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood

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