Variant report

Variant	rs72713608
Chromosome Location	chr1:159246874-159246875
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs12119586	0.90[AMR][1000 genomes]
rs12123454	0.81[AMR][1000 genomes]
rs12131906	0.81[AMR][1000 genomes]
rs12134212	0.90[AMR][1000 genomes]
rs12135235	0.90[AMR][1000 genomes]
rs16841988	0.81[AMR][1000 genomes]
rs2325933	0.90[EUR][1000 genomes]
rs55833893	0.95[EUR][1000 genomes]
rs55984710	0.95[EUR][1000 genomes]
rs72711380	0.90[EUR][1000 genomes]
rs72711384	0.95[EUR][1000 genomes]
rs72711385	0.95[EUR][1000 genomes]
rs72713622	0.90[AMR][1000 genomes]
rs72713642	0.90[EUR][1000 genomes]
rs72713644	0.90[AMR][1000 genomes]
rs72713647	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72713649	0.90[EUR][1000 genomes]
rs72713652	0.81[AMR][1000 genomes]
rs72713655	0.90[EUR][1000 genomes]
rs72713656	0.90[EUR][1000 genomes]
rs72713657	0.90[EUR][1000 genomes]
rs72713658	0.90[EUR][1000 genomes]
rs72713662	0.90[EUR][1000 genomes]
rs72713665	0.90[EUR][1000 genomes]
rs72713666	0.90[EUR][1000 genomes]
rs72713670	0.90[EUR][1000 genomes]
rs72713675	0.90[EUR][1000 genomes]
rs74122805	0.95[EUR][1000 genomes]
rs7530487	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs9651047	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv872487	chr1:159196765-159342439	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv872488	chr1:159218266-159336948	Flanking Active TSS Enhancers Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:159246000-159251800	Weak transcription	Primary monocytes fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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