Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:159283391..159285950-chr1:159289542..159292391,2	K562	blood:

Variant related genes	Relation type
ENSG00000196266	Chromatin interaction

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs12119226	0.83[AFR][1000 genomes]
rs12123454	0.86[AFR][1000 genomes]
rs16841988	0.86[AFR][1000 genomes]
rs16841997	0.83[AFR][1000 genomes]
rs2325931	0.91[AFR][1000 genomes]
rs2325933	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55833893	0.85[EUR][1000 genomes]
rs55984710	0.85[EUR][1000 genomes]
rs72711384	0.85[EUR][1000 genomes]
rs72711385	0.85[EUR][1000 genomes]
rs72713608	0.90[EUR][1000 genomes]
rs72713642	1.00[EUR][1000 genomes]
rs72713647	1.00[EUR][1000 genomes]
rs72713649	1.00[EUR][1000 genomes]
rs72713652	0.86[AFR][1000 genomes]
rs72713655	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72713656	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72713657	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72713658	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72713659	0.93[AFR][1000 genomes]
rs72713662	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72713665	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72713670	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72713675	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73029816	0.89[EUR][1000 genomes]
rs73029820	0.89[EUR][1000 genomes]
rs73029821	0.89[EUR][1000 genomes]
rs74122805	0.85[EUR][1000 genomes]
rs7530487	0.81[EUR][1000 genomes]
rs9651047	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv872487	chr1:159196765-159342439	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv872488	chr1:159218266-159336948	Flanking Active TSS Enhancers Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:159287800-159290400	Enhancers	HUVEC	blood vessel
2	chr1:159288400-159290000	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr1:159289400-159289800	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
4	chr1:159289600-159289800	Enhancers	Monocytes-CD14+_RO01746	blood

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