Variant report

Variant	rs72713647
Chromosome Location	chr1:159271482-159271483
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs12119586	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs12123454	0.81[AMR][1000 genomes]
rs12131906	0.81[AMR][1000 genomes]
rs12134212	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs12135235	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs16841988	0.81[AMR][1000 genomes]
rs2325933	1.00[EUR][1000 genomes]
rs55833893	0.85[EUR][1000 genomes]
rs55984710	0.85[EUR][1000 genomes]
rs72711384	0.85[EUR][1000 genomes]
rs72711385	0.85[EUR][1000 genomes]
rs72713608	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72713622	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs72713642	1.00[EUR][1000 genomes]
rs72713644	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs72713649	1.00[EUR][1000 genomes]
rs72713652	0.81[AMR][1000 genomes]
rs72713655	1.00[EUR][1000 genomes]
rs72713656	1.00[EUR][1000 genomes]
rs72713657	1.00[EUR][1000 genomes]
rs72713658	1.00[EUR][1000 genomes]
rs72713662	1.00[EUR][1000 genomes]
rs72713665	1.00[EUR][1000 genomes]
rs72713666	1.00[EUR][1000 genomes]
rs72713670	1.00[EUR][1000 genomes]
rs72713675	1.00[EUR][1000 genomes]
rs73029816	0.89[EUR][1000 genomes]
rs73029820	0.89[EUR][1000 genomes]
rs73029821	0.89[EUR][1000 genomes]
rs74122805	0.85[EUR][1000 genomes]
rs7530487	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9651047	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv872487	chr1:159196765-159342439	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv872488	chr1:159218266-159336948	Flanking Active TSS Enhancers Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:159269400-159272000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr1:159270600-159271800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
3	chr1:159271000-159274200	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr1:159271200-159272000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr1:159271400-159272200	Enhancers	Monocytes-CD14+_RO01746	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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