The 2.0 version of rSNPBase

Variant report

Variant rs72854535
Chromosome Location chr6:28322576-28322577
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:28318200-28322800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:28318400-28323000 Weak transcription Fetal Muscle Trunk muscle
3 chr6:28318400-28323600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr6:28318400-28332000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr6:28318400-28350800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr6:28318600-28322800 Weak transcription NHDF-Ad bronchial
7 chr6:28318600-28323000 Weak transcription Primary neutrophils fromperipheralblood blood
8 chr6:28318800-28322800 Weak transcription Fetal Kidney kidney
9 chr6:28319000-28323000 Weak transcription Primary monocytes fromperipheralblood blood
10 chr6:28319000-28323200 Weak transcription Primary B cells from peripheral blood blood
11 chr6:28319000-28323200 Weak transcription Small Intestine intestine
12 chr6:28319200-28322800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr6:28319200-28322800 Weak transcription Right Ventricle heart
14 chr6:28319200-28323000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr6:28319200-28323000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr6:28319200-28323000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr6:28319200-28323000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr6:28319200-28323000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr6:28319200-28323000 Weak transcription Fetal Intestine Large intestine
20 chr6:28319200-28323200 Weak transcription H1 Cell Line embryonic stem cell
21 chr6:28319200-28323200 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr6:28319200-28323200 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr6:28319200-28323200 Weak transcription Fetal Intestine Small intestine
24 chr6:28319200-28323400 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr6:28319200-28323400 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr6:28319200-28323600 Weak transcription H9 Cell Line embryonic stem cell
27 chr6:28319200-28323600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr6:28319200-28323600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr6:28319400-28322800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr6:28319400-28322800 Weak transcription Colon Smooth Muscle Colon
31 chr6:28319400-28323000 Weak transcription Brain Germinal Matrix brain
32 chr6:28319400-28323000 Weak transcription Monocytes-CD14+_RO01746 blood
33 chr6:28319400-28323200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr6:28319400-28323400 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr6:28319400-28323400 Weak transcription Primary B cells from cord blood blood
36 chr6:28319400-28323600 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr6:28319600-28322800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr6:28319600-28322800 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr6:28319600-28322800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr6:28319600-28322800 Weak transcription Fetal Lung lung
41 chr6:28319600-28322800 Weak transcription Hela-S3 cervix
42 chr6:28319600-28323000 Weak transcription Primary hematopoietic stem cells blood
43 chr6:28319600-28323000 Weak transcription Brain Substantia Nigra brain
44 chr6:28319600-28323000 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr6:28319600-28323000 Weak transcription Fetal Brain Male brain
46 chr6:28319600-28323000 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr6:28319600-28323200 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr6:28319600-28323200 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr6:28319600-28323400 Weak transcription Fetal Brain Female brain
50 chr6:28319600-28323400 Weak transcription Thymus Thymus

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Last update: Aug 31, 2015