Variant report
Variant | rs72877116 |
---|---|
Chromosome Location | chr3:55833393-55833394 |
allele | G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs12631767 | 0.84[ASN][1000 genomes] |
rs1495368 | 0.82[ASN][1000 genomes] |
rs1495369 | 0.82[ASN][1000 genomes] |
rs17272960 | 0.86[ASN][1000 genomes] |
rs17332241 | 0.85[ASN][1000 genomes] |
rs17714443 | 0.82[ASN][1000 genomes] |
rs2168818 | 0.91[ASN][1000 genomes] |
rs35664654 | 0.82[ASN][1000 genomes] |
rs4129821 | 0.91[ASN][1000 genomes] |
rs4129822 | 0.91[ASN][1000 genomes] |
rs4129823 | 0.88[ASN][1000 genomes] |
rs4260395 | 0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs4299453 | 0.87[ASN][1000 genomes] |
rs4493400 | 0.91[ASN][1000 genomes] |
rs4521190 | 0.86[ASN][1000 genomes] |
rs4955879 | 0.85[ASN][1000 genomes] |
rs4955880 | 0.83[ASN][1000 genomes] |
rs4955881 | 0.85[ASN][1000 genomes] |
rs4955883 | 0.86[ASN][1000 genomes] |
rs4974144 | 0.82[ASN][1000 genomes] |
rs4974145 | 0.91[ASN][1000 genomes] |
rs4974146 | 0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs56912263 | 0.86[ASN][1000 genomes] |
rs57802485 | 0.86[ASN][1000 genomes] |
rs60551886 | 0.82[ASN][1000 genomes] |
rs61072124 | 0.82[ASN][1000 genomes] |
rs73076938 | 0.82[ASN][1000 genomes] |
rs73076939 | 0.82[ASN][1000 genomes] |
rs73076947 | 0.84[ASN][1000 genomes] |
rs7641474 | 0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs9838012 | 0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs9840522 | 0.83[ASN][1000 genomes] |
rs9846380 | 0.92[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs9860951 | 0.83[ASN][1000 genomes] |
rs9866297 | 0.92[EUR][1000 genomes];0.89[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv876814 | chr3:55802749-55860526 | Weak transcription Enhancers Bivalent Enhancer | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr3:55831600-55833800 | Weak transcription | Fetal Kidney | kidney |