The 2.0 version of rSNPBase

Variant report

Variant rs73007978
Chromosome Location chr6:150526342-150526343
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:150517600-150529200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr6:150518200-150530800 Enhancers Fetal Heart heart
3 chr6:150521600-150526600 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr6:150523200-150526600 Enhancers Left Ventricle heart
5 chr6:150523200-150526600 Enhancers Right Ventricle heart
6 chr6:150523600-150526600 Weak transcription Pancreas Pancrea
7 chr6:150524000-150532400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr6:150524200-150526600 Enhancers Psoas Muscle Psoas
9 chr6:150524400-150526400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
10 chr6:150524800-150528400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr6:150524800-150528400 Weak transcription Placenta Amnion Placenta Amnion
12 chr6:150525200-150528600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr6:150525200-150529000 Weak transcription HMEC breast
14 chr6:150525400-150526400 Weak transcription Esophagus oesophagus
15 chr6:150525400-150528600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr6:150525400-150533400 Weak transcription Right Atrium heart
17 chr6:150525600-150526400 Bivalent Enhancer Fetal Muscle Trunk muscle
18 chr6:150525600-150526600 Enhancers Primary B cells from cord blood blood
19 chr6:150525600-150526600 Enhancers Primary hematopoietic stem cells short term culture blood
20 chr6:150525600-150526600 Enhancers Fetal Thymus thymus
21 chr6:150525600-150526800 Enhancers K562 blood
22 chr6:150525800-150526400 Enhancers Primary B cells from peripheral blood blood
23 chr6:150525800-150526400 Enhancers Osteobl bone
24 chr6:150525800-150526600 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr6:150525800-150526600 Enhancers Fetal Intestine Large intestine
26 chr6:150525800-150526600 Enhancers Fetal Intestine Small intestine
27 chr6:150525800-150526600 Enhancers Lung lung
28 chr6:150525800-150526600 Enhancers Sigmoid Colon Sigmoid Colon
29 chr6:150525800-150526600 Enhancers Spleen Spleen
30 chr6:150526000-150526400 Flanking Active TSS Duodenum Mucosa Duodenum
31 chr6:150526200-150526400 Enhancers Placenta Placenta
32 chr6:150526200-150526400 Enhancers Rectal Mucosa Donor 31 rectum
33 chr6:150526200-150526400 Enhancers Small Intestine intestine
34 chr6:150526200-150526600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr6:150526200-150526600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr6:150526200-150526600 Enhancers Skeletal Muscle Male skeletal muscle
37 chr6:150526200-150526600 Genic enhancers NHEK skin
38 chr6:150526200-150529000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015