The 2.0 version of rSNPBase

Variant report

Variant rs73196744
Chromosome Location chr13:50626245-50626246
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:50578600-50629800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr13:50578800-50654400 Weak transcription Esophagus oesophagus
3 chr13:50586800-50654200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr13:50587000-50633800 Weak transcription Hela-S3 cervix
5 chr13:50587000-50645600 Weak transcription Spleen Spleen
6 chr13:50588000-50645600 Weak transcription Ovary ovary
7 chr13:50589800-50645600 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr13:50590200-50653600 Weak transcription Small Intestine intestine
9 chr13:50594600-50635000 Weak transcription iPS-20b Cell Line embryonic stem cell
10 chr13:50594800-50641000 Weak transcription Lung lung
11 chr13:50594800-50643200 Weak transcription Brain Hippocampus Middle brain
12 chr13:50594800-50643600 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr13:50595000-50654200 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr13:50595200-50640000 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr13:50595800-50654400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr13:50598200-50629800 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr13:50598200-50634800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr13:50598200-50641000 Weak transcription Brain Inferior Temporal Lobe brain
19 chr13:50598600-50627800 Weak transcription Brain Germinal Matrix brain
20 chr13:50598600-50640000 Weak transcription Placenta Placenta
21 chr13:50598600-50650200 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr13:50601600-50641000 Weak transcription Left Ventricle heart
23 chr13:50604800-50634000 Weak transcription NHEK skin
24 chr13:50608600-50639800 Weak transcription NHLF lung
25 chr13:50611800-50646400 Strong transcription Fetal Thymus thymus
26 chr13:50612200-50639800 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr13:50612400-50639800 Strong transcription Dnd41 blood
28 chr13:50612400-50643000 Strong transcription Monocytes-CD14+_RO01746 blood
29 chr13:50612600-50639800 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr13:50612600-50644200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr13:50612800-50645400 Weak transcription HSMMtube muscle
32 chr13:50614000-50643800 Strong transcription Primary monocytes fromperipheralblood blood
33 chr13:50615200-50643200 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr13:50616000-50653600 Weak transcription Fetal Kidney kidney
35 chr13:50616600-50639800 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr13:50617400-50626400 Weak transcription Fetal Intestine Large intestine
37 chr13:50617400-50634200 Weak transcription Adipose Nuclei Adipose
38 chr13:50617400-50640400 Weak transcription Duodenum Mucosa Duodenum
39 chr13:50617400-50650000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr13:50617400-50654200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr13:50617600-50628800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr13:50617600-50634400 Weak transcription Muscle Satellite Cultured Cells --
43 chr13:50617800-50635200 Weak transcription Fetal Brain Female brain
44 chr13:50619200-50634600 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr13:50619400-50629200 Weak transcription HMEC breast
46 chr13:50619400-50640200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr13:50620000-50630000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
48 chr13:50621000-50627200 Weak transcription HUVEC blood vessel
49 chr13:50621000-50632000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr13:50621400-50628200 Weak transcription NH-A brain

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Last update: Aug 31, 2015