The 2.0 version of rSNPBase

Variant report

Variant rs73196734
Chromosome Location chr13:50591854-50591855
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:50573000-50594600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr13:50574000-50599600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr13:50577600-50594200 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr13:50577600-50594400 Weak transcription Fetal Brain Male brain
5 chr13:50578000-50596000 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr13:50578600-50604200 Strong transcription Dnd41 blood
7 chr13:50578600-50629800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr13:50578800-50654400 Weak transcription Esophagus oesophagus
9 chr13:50579000-50597200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr13:50579000-50598000 Weak transcription Pancreas Pancrea
11 chr13:50581800-50602800 Strong transcription Fetal Thymus thymus
12 chr13:50582200-50603600 Strong transcription Monocytes-CD14+_RO01746 blood
13 chr13:50584000-50592400 Strong transcription Primary monocytes fromperipheralblood blood
14 chr13:50584400-50599800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
15 chr13:50586800-50594600 Weak transcription Lung lung
16 chr13:50586800-50595600 Weak transcription H9 Cell Line embryonic stem cell
17 chr13:50586800-50601800 Weak transcription Gastric stomach
18 chr13:50586800-50654200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr13:50587000-50594200 Weak transcription A549 lung
20 chr13:50587000-50594400 Weak transcription Fetal Kidney kidney
21 chr13:50587000-50594600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr13:50587000-50594600 Weak transcription Colonic Mucosa Colon
23 chr13:50587000-50598200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr13:50587000-50603800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr13:50587000-50633800 Weak transcription Hela-S3 cervix
26 chr13:50587000-50645600 Weak transcription Spleen Spleen
27 chr13:50587200-50592000 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr13:50587200-50593000 Weak transcription Brain Germinal Matrix brain
29 chr13:50587200-50593000 Weak transcription Thymus Thymus
30 chr13:50587200-50597600 Weak transcription Placenta Amnion Placenta Amnion
31 chr13:50587200-50617000 Weak transcription HepG2 liver
32 chr13:50587400-50593200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr13:50587400-50593400 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr13:50587400-50593600 Weak transcription Primary hematopoietic stem cells blood
35 chr13:50587400-50597400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr13:50587400-50607600 Weak transcription Psoas Muscle Psoas
37 chr13:50587600-50592800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr13:50587600-50594000 Weak transcription Placenta Placenta
39 chr13:50587800-50597400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr13:50588000-50593000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr13:50588000-50645600 Weak transcription Ovary ovary
42 chr13:50588200-50592800 Weak transcription Duodenum Mucosa Duodenum
43 chr13:50588400-50594400 Weak transcription Primary T cells fromperipheralblood blood
44 chr13:50588400-50594400 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr13:50588600-50592200 Strong transcription Primary B cells from cord blood blood
46 chr13:50588800-50592000 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr13:50588800-50592400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr13:50588800-50592600 Weak transcription HMEC breast
49 chr13:50588800-50593200 Weak transcription Fetal Muscle Trunk muscle
50 chr13:50589000-50592600 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015