Variant report
Variant | rs732729 |
---|---|
Chromosome Location | chr13:50513535-50513536 |
allele | A/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1043208 | 0.90[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs10492746 | 0.90[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs1063181 | 0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1063183 | 1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs12100038 | 0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12100048 | 0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes] |
rs12583615 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12583637 | 0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12583652 | 0.85[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12583823 | 0.87[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs12584069 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12584122 | 0.85[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs12585753 | 0.90[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12585966 | 0.83[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs1323451 | 0.84[ASN][1000 genomes] |
rs17073655 | 0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs17073682 | 0.84[ASN][1000 genomes] |
rs17073724 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes] |
rs1807033 | 0.93[ASW][hapmap];0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.85[YRI][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2066540 | 0.87[ASW][hapmap];0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs2066546 | 0.85[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs2066547 | 0.85[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs2066552 | 0.87[ASW][hapmap];0.86[CEU][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs2066553 | 0.87[ASW][hapmap];0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs2066555 | 0.86[ASW][hapmap];0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];0.88[MEX][hapmap] |
rs2066559 | 0.84[ASN][1000 genomes] |
rs2066562 | 0.84[ASN][1000 genomes] |
rs2066565 | 0.84[ASN][1000 genomes] |
rs2066566 | 0.84[ASN][1000 genomes] |
rs2177313 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes] |
rs2181267 | 0.93[ASW][hapmap];0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.83[YRI][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2181268 | 0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2407881 | 0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs2407882 | 0.93[ASW][hapmap];0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.85[YRI][hapmap];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs41308548 | 0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4614628 | 0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs55638467 | 0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs55727821 | 0.86[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs55869555 | 0.85[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs57230741 | 0.85[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs59931782 | 0.87[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs60574696 | 0.85[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs60583460 | 0.85[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs60828549 | 0.81[EUR][1000 genomes] |
rs60926548 | 0.84[ASN][1000 genomes] |
rs61960398 | 0.85[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs61960442 | 0.81[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs61960445 | 0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs61960446 | 0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs61960447 | 0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs61960449 | 0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs61960450 | 0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs61960451 | 0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs61960454 | 0.87[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs61960455 | 0.87[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs61960457 | 0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs61961261 | 0.98[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs61961263 | 0.85[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs61961294 | 0.83[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs61961298 | 0.86[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs61961299 | 0.85[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs61961301 | 0.92[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs61961302 | 0.81[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs61961303 | 0.90[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs61961304 | 0.84[ASN][1000 genomes] |
rs61961305 | 0.84[ASN][1000 genomes] |
rs61961323 | 0.84[ASN][1000 genomes] |
rs61961324 | 0.84[ASN][1000 genomes] |
rs61961325 | 0.84[ASN][1000 genomes] |
rs61961327 | 0.84[ASN][1000 genomes] |
rs61961328 | 0.84[ASN][1000 genomes] |
rs6561571 | 0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs6561572 | 0.87[ASW][hapmap];0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs6561575 | 0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.84[ASN][1000 genomes] |
rs6561576 | 0.84[ASN][1000 genomes] |
rs66559968 | 0.84[ASN][1000 genomes] |
rs66756338 | 0.81[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs7319351 | 0.81[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs73194486 | 0.95[ASN][1000 genomes] |
rs73196708 | 1.00[ASN][1000 genomes] |
rs73196731 | 0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs73196734 | 0.84[ASN][1000 genomes] |
rs7325091 | 1.00[CHB][hapmap] |
rs7328892 | 0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7334063 | 0.87[ASW][hapmap];0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs7336477 | 0.89[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs7336927 | 0.84[ASN][1000 genomes] |
rs7339181 | 0.87[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.84[ASN][1000 genomes] |
rs74078717 | 0.89[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs790944 | 0.84[ASN][1000 genomes] |
rs7981648 | 0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];0.88[MEX][hapmap];0.83[TSI][hapmap] |
rs7982125 | 0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.84[ASN][1000 genomes] |
rs7984332 | 0.87[ASW][hapmap];0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs7984907 | 0.84[ASN][1000 genomes] |
rs7986364 | 1.00[CHB][hapmap];0.84[ASN][1000 genomes] |
rs7986432 | 0.87[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs7990502 | 0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes] |
rs7991454 | 1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs7992903 | 0.87[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs7994224 | 0.87[ASW][hapmap];0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs7995557 | 0.93[ASW][hapmap];0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.85[YRI][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7997305 | 0.87[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs7997402 | 0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs7997638 | 0.85[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs7998223 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes] |
rs7998391 | 0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs9670083 | 0.85[EUR][1000 genomes];1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv1836423 | chr13:50509784-50514706 | Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
2 | esv1836704 | chr13:50509784-50514706 | Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
3 | esv1838605 | chr13:50509784-50514706 | Active TSS Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
4 | esv1834429 | chr13:50509784-50536186 | Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
5 | esv2645198 | chr13:50512407-50515030 | Weak transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
6 | esv2511327 | chr13:50512530-50515645 | Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
7 | esv3518107 | chr13:50512790-50515230 | Weak transcription Enhancers Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
8 | nsv820932 | chr13:50512955-50515499 | Weak transcription Enhancers Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
9 | esv2393598 | chr13:50512991-50515044 | Enhancers Weak transcription Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
10 | esv3518096 | chr13:50512992-50515056 | Enhancers Weak transcription Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
11 | esv3518118 | chr13:50512992-50515056 | Weak transcription Enhancers Active TSS Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
12 | nsv826638 | chr13:50513047-50514921 | Weak transcription Enhancers Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
13 | nsv819405 | chr13:50513076-50515389 | Enhancers Flanking Active TSS Weak transcription Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
14 | esv16859 | chr13:50513125-50515315 | Flanking Active TSS Enhancers Weak transcription Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
15 | nsv561619 | chr13:50513148-50513718 | Enhancers Weak transcription Active TSS Flanking Active TSS | TF binding regionCpG islandlncRNA | 1 gene(s) | inside rSNPs | diseases |
16 | nsv561620 | chr13:50513148-50513964 | Weak transcription Enhancers Active TSS Flanking Active TSS | TF binding regionCpG islandlncRNA | 1 gene(s) | inside rSNPs | diseases |
17 | nsv561621 | chr13:50513148-50514120 | Enhancers Active TSS Weak transcription Flanking Active TSS | TF binding regionCpG islandlncRNA | 1 gene(s) | inside rSNPs | diseases |
18 | esv1838304 | chr13:50513148-50514174 | Enhancers Flanking Active TSS Weak transcription Active TSS | TF binding regionCpG islandlncRNA | 1 gene(s) | inside rSNPs | diseases |
19 | esv1841113 | chr13:50513148-50514174 | Enhancers Weak transcription Active TSS Flanking Active TSS | TF binding regionCpG islandlncRNA | 1 gene(s) | inside rSNPs | diseases |
20 | esv1842692 | chr13:50513148-50514174 | Weak transcription Active TSS Enhancers Flanking Active TSS | TF binding regionCpG islandlncRNA | 1 gene(s) | inside rSNPs | diseases |
21 | nsv561622 | chr13:50513148-50514174 | Enhancers Weak transcription Active TSS Flanking Active TSS | TF binding regionCpG islandlncRNA | 1 gene(s) | inside rSNPs | diseases |
22 | esv1835622 | chr13:50513148-50514281 | Flanking Active TSS Enhancers Weak transcription Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
23 | esv1840376 | chr13:50513148-50514281 | Enhancers Weak transcription Active TSS Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
24 | nsv561623 | chr13:50513148-50514281 | Enhancers Flanking Active TSS Active TSS Weak transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
25 | nsv561624 | chr13:50513148-50514559 | Enhancers Flanking Active TSS Weak transcription Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
26 | esv1834261 | chr13:50513148-50514706 | Enhancers Weak transcription Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
27 | esv1834394 | chr13:50513148-50514706 | Weak transcription Enhancers Active TSS Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
28 | esv1835099 | chr13:50513148-50514706 | Active TSS Weak transcription Enhancers Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
29 | esv1836798 | chr13:50513148-50514706 | Active TSS Weak transcription Enhancers Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
30 | esv1836911 | chr13:50513148-50514706 | Enhancers Flanking Active TSS Weak transcription Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
31 | esv1836935 | chr13:50513148-50514706 | Enhancers Active TSS Weak transcription Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
32 | esv1837606 | chr13:50513148-50514706 | Weak transcription Enhancers Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
33 | esv1839128 | chr13:50513148-50514706 | Flanking Active TSS Weak transcription Enhancers Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
34 | esv1839375 | chr13:50513148-50514706 | Enhancers Weak transcription Active TSS Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
35 | esv1842240 | chr13:50513148-50514706 | Flanking Active TSS Weak transcription Enhancers Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
36 | nsv561625 | chr13:50513148-50514706 | Weak transcription Flanking Active TSS Enhancers Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
37 | nsv561626 | chr13:50513148-50518728 | Weak transcription Flanking Active TSS Enhancers Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
38 | esv1837591 | chr13:50513148-50530603 | Weak transcription Enhancers Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
39 | nsv561627 | chr13:50513199-50514120 | Enhancers Flanking Active TSS Weak transcription Active TSS | TF binding regionCpG islandlncRNA | 1 gene(s) | inside rSNPs | diseases |
40 | nsv561628 | chr13:50513199-50514174 | Enhancers Weak transcription Flanking Active TSS Active TSS | TF binding regionCpG islandlncRNA | 1 gene(s) | inside rSNPs | diseases |
41 | nsv826639 | chr13:50513223-50514921 | Flanking Active TSS Enhancers Weak transcription Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
42 | nsv561629 | chr13:50513252-50514706 | Flanking Active TSS Weak transcription Enhancers Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
43 | nsv1035151 | chr13:50513535-51167850 | Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 1254 gene(s) | inside rSNPs | diseases |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr13:50511400-50537800 | Weak transcription | Left Ventricle | heart |
2 | chr13:50511600-50513800 | Enhancers | HepG2 | liver |
3 | chr13:50511600-50514600 | Enhancers | Fetal Intestine Large | intestine |
4 | chr13:50511600-50517800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
5 | chr13:50511800-50514200 | Enhancers | Fetal Intestine Small | intestine |
6 | chr13:50512200-50514000 | Enhancers | Adipose Nuclei | Adipose |
7 | chr13:50512600-50514200 | Enhancers | Fetal Lung | lung |
8 | chr13:50512600-50514400 | Weak transcription | HSMMtube | muscle |
9 | chr13:50512600-50515600 | Weak transcription | Stomach Mucosa | stomach |
10 | chr13:50512800-50513600 | Enhancers | Duodenum Mucosa | Duodenum |
11 | chr13:50512800-50513800 | Enhancers | Duodenum Smooth Muscle | Duodenum |
12 | chr13:50512800-50513800 | Active TSS | Rectal Mucosa Donor 29 | rectum |
13 | chr13:50512800-50513800 | Enhancers | NHLF | lung |
14 | chr13:50513000-50513800 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
15 | chr13:50513000-50513800 | Enhancers | Fetal Kidney | kidney |
16 | chr13:50513000-50514200 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
17 | chr13:50513200-50513600 | Flanking Active TSS | Pancreatic Islets | Pancreatic Islet |
18 | chr13:50513200-50513800 | Enhancers | Fetal Heart | heart |
19 | chr13:50513400-50513600 | Flanking Active TSS | Rectal Mucosa Donor 31 | rectum |
20 | chr13:50513400-50514000 | Enhancers | Stomach Smooth Muscle | stomach |
21 | chr13:50513400-50514200 | Enhancers | Liver | Liver |
22 | chr13:50513400-50532600 | Weak transcription | Ovary | ovary |
23 | chr13:50513400-50532800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |