Variant report
| Variant | rs61961327 |
|---|---|
| Chromosome Location | chr13:50653384-50653385 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr13:50578800-50654400 | Weak transcription | Esophagus | oesophagus |
| 2 | chr13:50586800-50654200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 3 | chr13:50590200-50653600 | Weak transcription | Small Intestine | intestine |
| 4 | chr13:50595000-50654200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 5 | chr13:50595800-50654400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 6 | chr13:50616000-50653600 | Weak transcription | Fetal Kidney | kidney |
| 7 | chr13:50617400-50654200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 8 | chr13:50622600-50653400 | Weak transcription | Fetal Brain Male | brain |
| 9 | chr13:50622800-50653400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 10 | chr13:50624400-50654200 | Weak transcription | Pancreas | Pancrea |
| 11 | chr13:50625400-50654200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 12 | chr13:50626600-50654000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 13 | chr13:50633000-50653600 | Weak transcription | Fetal Stomach | stomach |
| 14 | chr13:50638400-50653400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 15 | chr13:50641400-50654200 | Weak transcription | Left Ventricle | heart |
| 16 | chr13:50641600-50653600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 17 | chr13:50641800-50654400 | Weak transcription | Lung | lung |
| 18 | chr13:50642600-50653600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 19 | chr13:50642600-50654600 | Weak transcription | Gastric | stomach |
| 20 | chr13:50643200-50653400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 21 | chr13:50646000-50654200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 22 | chr13:50646000-50654400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 23 | chr13:50646200-50654400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 24 | chr13:50646600-50653400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 25 | chr13:50648400-50657400 | Active TSS | GM12878-XiMat | blood |
| 26 | chr13:50649200-50655200 | Active TSS | Brain Germinal Matrix | brain |
| 27 | chr13:50650400-50653600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 28 | chr13:50650400-50653600 | Weak transcription | Fetal Intestine Small | intestine |
| 29 | chr13:50650400-50654200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 30 | chr13:50651000-50653600 | Weak transcription | Brain Substantia Nigra | brain |
| 31 | chr13:50651000-50654200 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 32 | chr13:50651400-50653800 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 33 | chr13:50651600-50653600 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 34 | chr13:50651600-50654400 | Flanking Active TSS | Primary B cells from cord blood | blood |
| 35 | chr13:50651600-50654400 | Active TSS | Primary Natural Killer cells fromperipheralblood | blood |
| 36 | chr13:50651600-50654800 | Flanking Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 37 | chr13:50651600-50656800 | Active TSS | Fetal Thymus | thymus |
| 38 | chr13:50651600-50657200 | Active TSS | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 39 | chr13:50651800-50654200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 40 | chr13:50651800-50656600 | Active TSS | Ganglion Eminence derived primary cultured neurospheres | brain |
| 41 | chr13:50651800-50658200 | Active TSS | HMEC | breast |
| 42 | chr13:50651800-50659600 | Active TSS | K562 | blood |
| 43 | chr13:50652200-50653400 | Flanking Active TSS | NHEK | skin |
| 44 | chr13:50652200-50653400 | Flanking Active TSS | Osteobl | bone |
| 45 | chr13:50652200-50653600 | Flanking Active TSS | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 46 | chr13:50652200-50654200 | Active TSS | Adipose Nuclei | Adipose |
| 47 | chr13:50652200-50654600 | Active TSS | Stomach Smooth Muscle | stomach |
| 48 | chr13:50652200-50656600 | Active TSS | Fetal Brain Female | brain |
| 49 | chr13:50652200-50658000 | Active TSS | HSMMtube | muscle |
| 50 | chr13:50652400-50653600 | Enhancers | Primary T helper cells fromperipheralblood | blood |
