Variant report

Variant rs60583460
Chromosome Location chr13:50573576-50573577
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:50569800-50573600 Active TSS ES-I3 Cell Line embryonic stem cell
2 chr13:50570000-50574000 Active TSS H9 Cell Line embryonic stem cell
3 chr13:50570200-50573600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr13:50571800-50585200 Weak transcription Gastric stomach
5 chr13:50572000-50574600 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr13:50572000-50574600 Enhancers Stomach Mucosa stomach
7 chr13:50572000-50574800 Transcr. at gene 5' and 3' Dnd41 blood
8 chr13:50572000-50578400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr13:50572000-50578400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr13:50572000-50585800 Weak transcription Ovary ovary
11 chr13:50572200-50573600 Transcr. at gene 5' and 3' Primary B cells from cord blood blood
12 chr13:50572200-50573600 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
13 chr13:50572200-50573800 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
14 chr13:50572200-50573800 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr13:50572200-50574200 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
16 chr13:50572200-50574400 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr13:50572200-50574400 Genic enhancers Primary T cells fromperipheralblood blood
18 chr13:50572200-50574600 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
19 chr13:50572200-50574600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
20 chr13:50572400-50573600 Genic enhancers Placenta Placenta
21 chr13:50572400-50573800 Transcr. at gene 5' and 3' Primary T cells from cord blood blood
22 chr13:50572400-50573800 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
23 chr13:50572400-50574000 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr13:50572400-50574200 Transcr. at gene 5' and 3' H1 Cell Line embryonic stem cell
25 chr13:50572400-50574200 Genic enhancers Primary B cells from peripheral blood blood
26 chr13:50572400-50574800 Genic enhancers Primary T helper cells fromperipheralblood blood
27 chr13:50572400-50574800 Enhancers Primary T killer memory cells from peripheral blood blood
28 chr13:50572400-50574800 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr13:50572400-50574800 Transcr. at gene 5' and 3' GM12878-XiMat blood
30 chr13:50572600-50573600 Genic enhancers HSMM muscle
31 chr13:50572600-50573800 Transcr. at gene 5' and 3' Primary T regulatory cells fromperipheralblood blood
32 chr13:50572600-50573800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
33 chr13:50572600-50573800 Genic enhancers Fetal Stomach stomach
34 chr13:50572600-50574000 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin03 Skin
35 chr13:50572600-50574200 Enhancers Primary hematopoietic stem cells blood
36 chr13:50572600-50574200 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
37 chr13:50572600-50574200 Genic enhancers Fetal Adrenal Gland Adrenal Gland
38 chr13:50572600-50574200 Genic enhancers Fetal Muscle Leg muscle
39 chr13:50572600-50574200 Transcr. at gene 5' and 3' HUVEC blood vessel
40 chr13:50572600-50574400 Enhancers Brain Angular Gyrus brain
41 chr13:50572600-50574600 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
42 chr13:50572600-50574600 Genic enhancers Fetal Lung lung
43 chr13:50572600-50574800 Genic enhancers Adipose Nuclei Adipose
44 chr13:50572600-50574800 Enhancers Rectal Mucosa Donor 31 rectum
45 chr13:50572600-50574800 Genic enhancers Skeletal Muscle Male skeletal muscle
46 chr13:50572600-50575600 Genic enhancers Fetal Intestine Small intestine
47 chr13:50572600-50577600 Enhancers Primary T helper naive cells fromperipheralblood blood
48 chr13:50572600-50578400 Weak transcription Esophagus oesophagus
49 chr13:50572600-50579200 Weak transcription HSMMtube muscle
50 chr13:50572600-50589600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell

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