Variant report

Variant rs2066553
Chromosome Location chr13:50596333-50596334
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:50574000-50599600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
2 chr13:50578600-50604200 Strong transcription Dnd41 blood
3 chr13:50578600-50629800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr13:50578800-50654400 Weak transcription Esophagus oesophagus
5 chr13:50579000-50597200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr13:50579000-50598000 Weak transcription Pancreas Pancrea
7 chr13:50581800-50602800 Strong transcription Fetal Thymus thymus
8 chr13:50582200-50603600 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr13:50584400-50599800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
10 chr13:50586800-50601800 Weak transcription Gastric stomach
11 chr13:50586800-50654200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr13:50587000-50598200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr13:50587000-50603800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr13:50587000-50633800 Weak transcription Hela-S3 cervix
15 chr13:50587000-50645600 Weak transcription Spleen Spleen
16 chr13:50587200-50597600 Weak transcription Placenta Amnion Placenta Amnion
17 chr13:50587200-50617000 Weak transcription HepG2 liver
18 chr13:50587400-50597400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr13:50587400-50607600 Weak transcription Psoas Muscle Psoas
20 chr13:50587800-50597400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr13:50588000-50645600 Weak transcription Ovary ovary
22 chr13:50589200-50597400 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr13:50589800-50645600 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr13:50590000-50603000 Weak transcription Stomach Smooth Muscle stomach
25 chr13:50590000-50624200 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr13:50590200-50596800 Weak transcription Right Ventricle heart
27 chr13:50590200-50598600 Weak transcription Right Atrium heart
28 chr13:50590200-50653600 Weak transcription Small Intestine intestine
29 chr13:50590400-50599000 Weak transcription Brain Angular Gyrus brain
30 chr13:50590400-50604400 Weak transcription NHEK skin
31 chr13:50590800-50596800 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr13:50590800-50598000 Weak transcription Brain Anterior Caudate brain
33 chr13:50590800-50598400 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr13:50590800-50604600 Weak transcription K562 blood
35 chr13:50591000-50599600 Weak transcription Aorta Aorta
36 chr13:50591000-50600800 Weak transcription Colon Smooth Muscle Colon
37 chr13:50591000-50603200 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr13:50591000-50609600 Weak transcription Brain Substantia Nigra brain
39 chr13:50591200-50600600 Weak transcription GM12878-XiMat blood
40 chr13:50591400-50597800 Weak transcription HUVEC blood vessel
41 chr13:50591400-50599400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr13:50591600-50598600 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr13:50592000-50602200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr13:50592200-50597800 Weak transcription Brain Inferior Temporal Lobe brain
45 chr13:50592400-50596800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr13:50592400-50597800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr13:50592400-50598400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr13:50592600-50597000 Strong transcription Fetal Lung lung
49 chr13:50592800-50596600 Weak transcription Rectal Smooth Muscle rectum
50 chr13:50592800-50596800 Strong transcription Duodenum Mucosa Duodenum

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