Variant report
Variant | rs73228364 |
---|---|
Chromosome Location | chr7:96370686-96370687 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr7:96367811..96371056-chr7:96371322..96374306,3 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10226466 | 0.93[EUR][1000 genomes] |
rs10234669 | 0.85[EUR][1000 genomes] |
rs10236162 | 0.81[EUR][1000 genomes] |
rs10242066 | 0.88[EUR][1000 genomes] |
rs10246774 | 0.93[EUR][1000 genomes] |
rs10249910 | 0.81[EUR][1000 genomes] |
rs10252396 | 0.93[EUR][1000 genomes] |
rs10259875 | 0.93[EUR][1000 genomes] |
rs10270175 | 0.93[EUR][1000 genomes] |
rs10270486 | 0.93[EUR][1000 genomes] |
rs10273237 | 0.93[EUR][1000 genomes] |
rs10276660 | 0.93[EUR][1000 genomes] |
rs10278521 | 0.85[EUR][1000 genomes] |
rs1581538 | 0.88[EUR][1000 genomes] |
rs1608739 | 0.88[EUR][1000 genomes] |
rs17167680 | 0.81[EUR][1000 genomes] |
rs17167699 | 0.93[EUR][1000 genomes] |
rs17413240 | 0.87[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs1917482 | 0.88[EUR][1000 genomes] |
rs2140741 | 0.88[EUR][1000 genomes] |
rs2272 | 0.93[EUR][1000 genomes] |
rs3942589 | 0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs55902035 | 0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs67368115 | 0.85[EUR][1000 genomes] |
rs67548673 | 0.93[EUR][1000 genomes] |
rs67658953 | 0.88[EUR][1000 genomes] |
rs73228327 | 0.88[EUR][1000 genomes] |
rs73228328 | 0.85[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs73228329 | 0.84[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs73228347 | 0.93[EUR][1000 genomes] |
rs73228355 | 0.93[EUR][1000 genomes] |
rs73228356 | 0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs73228360 | 0.93[EUR][1000 genomes] |
rs7341440 | 0.93[EUR][1000 genomes] |
rs952005 | 0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv532174 | chr7:96221237-96375826 | Strong transcription Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 15 gene(s) | inside rSNPs | diseases |
2 | nsv831065 | chr7:96275832-96436031 | Strong transcription Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 14 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr7:96351400-96372800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
2 | chr7:96369800-96372600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
3 | chr7:96369800-96373400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |