The 2.0 version of rSNPBase

Variant report

Variant rs73228590
Chromosome Location chr3:111629582-111629583
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111591600-111633200 Weak transcription Fetal Kidney kidney
2 chr3:111604000-111632200 Weak transcription Gastric stomach
3 chr3:111604400-111632200 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr3:111604800-111632000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr3:111605000-111629800 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr3:111617600-111631800 Weak transcription H9 Cell Line embryonic stem cell
7 chr3:111620000-111643200 Weak transcription Esophagus oesophagus
8 chr3:111621800-111632200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr3:111622400-111630400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr3:111622400-111630400 Weak transcription Pancreas Pancrea
11 chr3:111622800-111630200 Weak transcription Fetal Intestine Small intestine
12 chr3:111623400-111641200 Weak transcription Lung lung
13 chr3:111623600-111629800 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr3:111623800-111640200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr3:111624200-111629600 Weak transcription Fetal Brain Male brain
16 chr3:111624600-111632800 Enhancers Fetal Heart heart
17 chr3:111624600-111643200 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr3:111625800-111630200 Weak transcription Right Atrium heart
19 chr3:111626200-111629600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr3:111626200-111630200 Weak transcription Fetal Intestine Large intestine
21 chr3:111626400-111630200 Weak transcription Small Intestine intestine
22 chr3:111626400-111632200 Weak transcription HepG2 liver
23 chr3:111626600-111632000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr3:111626800-111630600 Enhancers Left Ventricle heart
25 chr3:111627800-111632000 Weak transcription Fetal Stomach stomach
26 chr3:111628000-111629600 Weak transcription Aorta Aorta
27 chr3:111628400-111630200 Weak transcription Fetal Muscle Leg muscle
28 chr3:111628400-111632200 Weak transcription Fetal Muscle Trunk muscle
29 chr3:111628400-111641600 Weak transcription Spleen Spleen
30 chr3:111628600-111630000 Genic enhancers NHEK skin
31 chr3:111628600-111632000 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr3:111628600-111632200 Enhancers A549 lung
33 chr3:111628800-111630400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr3:111628800-111630400 Enhancers HUVEC blood vessel
35 chr3:111628800-111630600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr3:111628800-111630800 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr3:111628800-111631000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
38 chr3:111628800-111631000 Enhancers NH-A brain
39 chr3:111628800-111631400 Enhancers HMEC breast
40 chr3:111629000-111630200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr3:111629000-111631200 Enhancers Adipose Nuclei Adipose
42 chr3:111629200-111629600 Enhancers Brain Angular Gyrus brain
43 chr3:111629200-111630000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr3:111629200-111630000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
45 chr3:111629200-111630400 Enhancers Hela-S3 cervix
46 chr3:111629200-111630600 Enhancers Muscle Satellite Cultured Cells --
47 chr3:111629200-111630600 Enhancers Duodenum Smooth Muscle Duodenum
48 chr3:111629200-111630800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
49 chr3:111629200-111630800 Enhancers NHDF-Ad bronchial
50 chr3:111629200-111631000 Enhancers Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015