The 2.0 version of rSNPBase

Variant report

Variant rs73352029
Chromosome Location chr10:116201288-116201289
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116187000-116210400 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr10:116187200-116203000 Weak transcription Colon Smooth Muscle Colon
3 chr10:116187600-116204600 Weak transcription Spleen Spleen
4 chr10:116187800-116207600 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr10:116188000-116211000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr10:116189200-116231000 Strong transcription Primary T cells from cord blood blood
7 chr10:116189400-116211800 Strong transcription Primary T helper naive cells fromperipheralblood blood
8 chr10:116189800-116207600 Strong transcription Primary B cells from cord blood blood
9 chr10:116189800-116232200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr10:116190200-116218600 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr10:116190400-116205400 Strong transcription Liver Liver
12 chr10:116190800-116214200 Strong transcription Primary T helper cells PMA-I stimulated --
13 chr10:116191800-116206400 Strong transcription Primary T regulatory cells fromperipheralblood blood
14 chr10:116192000-116205600 Strong transcription Fetal Muscle Leg muscle
15 chr10:116192200-116202600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr10:116192200-116230600 Strong transcription Primary T helper cells fromperipheralblood blood
17 chr10:116192800-116205000 Strong transcription Adipose Nuclei Adipose
18 chr10:116192800-116205400 Strong transcription Fetal Intestine Large intestine
19 chr10:116192800-116212400 Strong transcription Left Ventricle heart
20 chr10:116192800-116213400 Strong transcription Primary T cells fromperipheralblood blood
21 chr10:116192800-116231000 Strong transcription Primary B cells from peripheral blood blood
22 chr10:116193000-116201600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr10:116193000-116202200 Strong transcription Fetal Stomach stomach
24 chr10:116193000-116205400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
25 chr10:116193000-116205800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
26 chr10:116193000-116208200 Strong transcription HSMMtube muscle
27 chr10:116193200-116205600 Strong transcription Rectal Mucosa Donor 29 rectum
28 chr10:116193200-116210800 Weak transcription H9 Cell Line embryonic stem cell
29 chr10:116193600-116202200 Strong transcription Rectal Mucosa Donor 31 rectum
30 chr10:116193600-116204800 Strong transcription Primary hematopoietic stem cells short term culture blood
31 chr10:116193600-116205800 Strong transcription Fetal Muscle Trunk muscle
32 chr10:116193600-116230800 Weak transcription GM12878-XiMat blood
33 chr10:116193800-116211600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr10:116194000-116202200 Strong transcription Sigmoid Colon Sigmoid Colon
35 chr10:116194000-116205400 Strong transcription Ovary ovary
36 chr10:116194000-116215800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
37 chr10:116194200-116205400 Strong transcription Primary T helper naive cells from peripheral blood blood
38 chr10:116194400-116201800 Strong transcription HUES64 Cell Line embryonic stem cell
39 chr10:116194400-116202200 Strong transcription Fetal Thymus thymus
40 chr10:116194400-116205200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr10:116194400-116205400 Strong transcription Primary T killer naive cells fromperipheralblood blood
42 chr10:116194400-116205800 Strong transcription Fetal Intestine Small intestine
43 chr10:116194400-116251600 Weak transcription Small Intestine intestine
44 chr10:116196600-116213400 Weak transcription NHEK skin
45 chr10:116196800-116203600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr10:116197600-116201800 Strong transcription Primary T killer memory cells from peripheral blood blood
47 chr10:116197600-116202200 Strong transcription Fetal Heart heart
48 chr10:116197600-116202600 Strong transcription Skeletal Muscle Female skeletal muscle
49 chr10:116197800-116202400 Strong transcription Fetal Lung lung
50 chr10:116197800-116202600 Strong transcription HepG2 liver

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Last update: Aug 31, 2015