Variant report

Variant	rs73403272
Chromosome Location	chr7:99134208-99134209
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:99132310..99135851-chr7:99138488..99140065,3	K562	blood:
2	chr7:99132981..99135156-chr7:99152620..99155235,2	K562	blood:
3	chr7:99133649..99135851-chr7:99138488..99140065,2	K562	blood:
4	chr7:99129504..99131307-chr7:99134135..99135711,2	K562	blood:

Extended variants
information (count: 65 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:65)

rs_ID	r²[population]
rs10251282	0.94[ASN][1000 genomes]
rs10279308	0.89[ASN][1000 genomes]
rs1045012	0.94[ASN][1000 genomes]
rs11734	0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11972210	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11978089	0.89[ASN][1000 genomes]
rs17161726	0.94[ASN][1000 genomes]
rs17854665	0.89[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs2003499	0.89[ASN][1000 genomes]
rs2293256	0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2404487	0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2404488	0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs28365067	0.94[ASN][1000 genomes]
rs28377312	0.94[ASN][1000 genomes]
rs28460612	0.94[ASN][1000 genomes]
rs28558950	0.94[ASN][1000 genomes]
rs28668326	0.94[ASN][1000 genomes]
rs28753399	0.94[ASN][1000 genomes]
rs34943973	0.94[ASN][1000 genomes]
rs3528	0.94[ASN][1000 genomes]
rs3823813	0.88[ASN][1000 genomes]
rs41258334	0.94[ASN][1000 genomes]
rs45441991	0.88[ASN][1000 genomes]
rs45448997	0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs45451992	0.94[ASN][1000 genomes]
rs45461000	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs45492501	0.86[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs45529541	0.86[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs45555335	0.82[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs45592335	0.88[ASN][1000 genomes]
rs45593341	0.88[ASN][1000 genomes]
rs55830753	0.88[ASN][1000 genomes]
rs55927283	0.86[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs55942267	0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs56167514	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57367781	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57830676	0.88[ASN][1000 genomes]
rs59240302	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs59574285	0.94[ASN][1000 genomes]
rs59672032	0.83[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs6956305	0.94[ASN][1000 genomes]
rs6974831	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6976017	0.94[ASN][1000 genomes]
rs6977165	0.94[ASN][1000 genomes]
rs73397447	0.94[ASN][1000 genomes]
rs73397481	0.93[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs73397499	0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs73401507	0.82[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs73401510	0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs73401516	0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs73403247	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73403286	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73403290	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73405247	0.93[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73711280	0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs73711293	1.00[ASN][1000 genomes]
rs73711294	1.00[ASN][1000 genomes]
rs73713507	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73713531	0.94[ASN][1000 genomes]
rs73713580	0.94[ASN][1000 genomes]
rs7794068	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7805661	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7806754	0.88[ASN][1000 genomes]
rs917152	0.94[ASN][1000 genomes]
rs952319	0.94[ASN][1000 genomes]

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:99130200-99138200	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr7:99130200-99138200	Weak transcription	Hela-S3	cervix
3	chr7:99130800-99135800	Weak transcription	Primary T cells from cord blood	blood
4	chr7:99131400-99137000	Weak transcription	HepG2	liver
5	chr7:99131400-99138200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr7:99131600-99137000	Weak transcription	K562	blood
7	chr7:99131600-99138000	Weak transcription	Brain Substantia Nigra	brain
8	chr7:99131600-99138200	Weak transcription	Brain Hippocampus Middle	brain
9	chr7:99131600-99138200	Weak transcription	Brain Inferior Temporal Lobe	brain
10	chr7:99131600-99138200	Weak transcription	Left Ventricle	heart
11	chr7:99131600-99138200	Weak transcription	Ovary	ovary
12	chr7:99131600-99138200	Weak transcription	HSMMtube	muscle
13	chr7:99131600-99140600	Weak transcription	Right Ventricle	heart
14	chr7:99131800-99135400	Weak transcription	Stomach Smooth Muscle	stomach
15	chr7:99131800-99136000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr7:99131800-99137000	Weak transcription	NH-A	brain
17	chr7:99131800-99144000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr7:99132000-99134800	Weak transcription	Muscle Satellite Cultured Cells	--
19	chr7:99132200-99135000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
20	chr7:99132600-99140800	Weak transcription	Brain Cingulate Gyrus	brain
21	chr7:99132600-99148600	Weak transcription	Brain Angular Gyrus	brain
22	chr7:99132800-99138000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr7:99132800-99138000	Weak transcription	Brain Anterior Caudate	brain
24	chr7:99132800-99138200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
25	chr7:99133000-99138000	Weak transcription	Fetal Brain Female	brain
26	chr7:99133200-99137200	Weak transcription	Brain Germinal Matrix	brain
27	chr7:99133800-99145000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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